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Compile Data Set for Download or QSAR

Found 20 hits of affinity data for UniProtKB/TrEMBL: P07379   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM181109
PNG
(3-Mercaptopicolinic acid (MPA))
Show SMILES OC(=O)c1ncccc1S
Show InChI InChI=1S/C6H5NO2S/c8-6(9)5-4(10)2-1-3-7-5/h1-3,10H,(H,8,9)
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3.70E+4 -25.3n/an/an/an/an/an/a25



The University of Kansas Medical Center



Assay Description
OAA/PEP binding site. When the enzyme was assayed in the direction of PEP →OAA, the standard reaction mixture contained 50 mM HEPES (pH 7.5), 2...


Biochemistry 54: 5878-87 (2015)


Article DOI: 10.1021/acs.biochem.5b00822
BindingDB Entry DOI: 10.7270/Q2M61J1Q
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Phosphoenolpyruvate carboxykinase, cytosolic [GTP] [H477R]


(Rattus norvegicus (Rat))
BDBM223201
PNG
(β-Sulfopyruvate)
Show SMILES OC(=O)C(=O)CS(O)(=O)=O
Show InChI InChI=1S/C3H4O6S/c4-2(3(5)6)1-10(7,8)9/h1H2,(H,5,6)(H,7,8,9)
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3.70E+4n/an/an/an/an/an/an/an/a



University of Waterloo



Assay Description
The inhibition of H477R PEPCK by β-sulfopyruvate (βSP), oxalate, and GMPPCP was conducted in the direction of PEP synthesis (OAA → PE...


Biochemistry 56: 2106-2115 (2017)


Article DOI: 10.1021/acs.biochem.7b00178
BindingDB Entry DOI: 10.7270/Q2D50KTV
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM181109
PNG
(3-Mercaptopicolinic acid (MPA))
Show SMILES OC(=O)c1ncccc1S
Show InChI InChI=1S/C6H5NO2S/c8-6(9)5-4(10)2-1-3-7-5/h1-3,10H,(H,8,9)
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4.50E+4 -24.8n/an/an/an/an/an/a25



The University of Kansas Medical Center



Assay Description
OAA/PEP binding site. The activity of PEPCK in the direction from OAA to PEP was assayed with 50 mM HEPES (pH 7.5), 10 mM DTT, 4 mM MgCl2, 0.5 mM GTP...


Biochemistry 54: 5878-87 (2015)


Article DOI: 10.1021/acs.biochem.5b00822
BindingDB Entry DOI: 10.7270/Q2M61J1Q
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM181109
PNG
(3-Mercaptopicolinic acid (MPA))
Show SMILES OC(=O)c1ncccc1S
Show InChI InChI=1S/C6H5NO2S/c8-6(9)5-4(10)2-1-3-7-5/h1-3,10H,(H,8,9)
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8.30E+4 -23.3n/an/an/an/an/an/a25



The University of Kansas Medical Center



Assay Description
Allosteric binding site. When the enzyme was assayed in the direction of PEP →OAA, the standard reaction mixture contained 50 mM HEPES (pH 7.5)...


Biochemistry 54: 5878-87 (2015)


Article DOI: 10.1021/acs.biochem.5b00822
BindingDB Entry DOI: 10.7270/Q2M61J1Q
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM181109
PNG
(3-Mercaptopicolinic acid (MPA))
Show SMILES OC(=O)c1ncccc1S
Show InChI InChI=1S/C6H5NO2S/c8-6(9)5-4(10)2-1-3-7-5/h1-3,10H,(H,8,9)
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8.30E+4 -23.3n/an/an/an/an/an/a25



The University of Kansas Medical Center



Assay Description
OAA/PEP binding site. When the enzyme was assayed in the direction of PEP →OAA, the standard reaction mixture contained 50 mM HEPES (pH 7.5), 2...


Biochemistry 54: 5878-87 (2015)


Article DOI: 10.1021/acs.biochem.5b00822
BindingDB Entry DOI: 10.7270/Q2M61J1Q
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM181109
PNG
(3-Mercaptopicolinic acid (MPA))
Show SMILES OC(=O)c1ncccc1S
Show InChI InChI=1S/C6H5NO2S/c8-6(9)5-4(10)2-1-3-7-5/h1-3,10H,(H,8,9)
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1.21E+5 -22.4n/an/an/an/an/an/a25



The University of Kansas Medical Center



Assay Description
Allosteric binding site. The activity of PEPCK in the direction from OAA to PEP was assayed with 50 mM HEPES (pH 7.5), 10 mM DTT, 4 mM MgCl2, 0.5 mM ...


Biochemistry 54: 5878-87 (2015)


Article DOI: 10.1021/acs.biochem.5b00822
BindingDB Entry DOI: 10.7270/Q2M61J1Q
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM223202
PNG
(β,γ-methyleneguanosine 5′-triphosp...)
Show SMILES Nc1nc([O-])c2ncn([C@@H]3O[C@H](COP(O)(=O)OP(O)(=O)C[P+](O)(O)[O-])[C@@H](O)[C@H]3O)c2n1
Show InChI InChI=1S/C11H18N5O13P3/c12-11-14-8-5(9(19)15-11)13-2-16(8)10-7(18)6(17)4(28-10)1-27-32(25,26)29-31(23,24)3-30(20,21)22/h2,4,6-7,10,17-18H,1,3H2,(H,23,24)(H,25,26)(H2,20,21,22)(H3,12,14,15,19)/p-1/t4-,6-,7-,10-/m1/s1
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1.50E+5n/an/an/an/an/an/an/an/a



University of Waterloo



Assay Description
The inhibition of H477R PEPCK by β-sulfopyruvate (βSP), oxalate, and GMPPCP was conducted in the direction of PEP synthesis (OAA → PE...


Biochemistry 56: 2106-2115 (2017)


Article DOI: 10.1021/acs.biochem.7b00178
BindingDB Entry DOI: 10.7270/Q2D50KTV
More data for this
Ligand-Target Pair
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM181109
PNG
(3-Mercaptopicolinic acid (MPA))
Show SMILES OC(=O)c1ncccc1S
Show InChI InChI=1S/C6H5NO2S/c8-6(9)5-4(10)2-1-3-7-5/h1-3,10H,(H,8,9)
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1.80E+5 -21.4n/an/an/an/an/an/a25



The University of Kansas Medical Center



Assay Description
Allosteric binding site. When the enzyme was assayed in the direction of PEP →OAA, the standard reaction mixture contained 50 mM HEPES (pH 7.5)...


Biochemistry 54: 5878-87 (2015)


Article DOI: 10.1021/acs.biochem.5b00822
BindingDB Entry DOI: 10.7270/Q2M61J1Q
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Phosphoenolpyruvate carboxykinase, cytosolic [GTP] [H477R]


(Rattus norvegicus (Rat))
BDBM50366413
PNG
(PHOSPHOENOLPYRUVATE)
Show SMILES OC(=O)C(=C)OP(O)(O)=O
Show InChI InChI=1S/C3H5O6P/c1-2(3(4)5)9-10(6,7)8/h1H2,(H,4,5)(H2,6,7,8)
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2.89E+5n/an/an/an/an/an/an/an/a



University of Waterloo



Assay Description
The inhibition of H477R PEPCK by β-sulfopyruvate (βSP), oxalate, and GMPPCP was conducted in the direction of PEP synthesis (OAA → PE...


Biochemistry 56: 2106-2115 (2017)


Article DOI: 10.1021/acs.biochem.7b00178
BindingDB Entry DOI: 10.7270/Q2D50KTV
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Phosphoenolpyruvate carboxykinase, cytosolic [GTP] [H477R]


(Rattus norvegicus (Rat))
BDBM23230
PNG
(2-Oxosuccinic acid | 2-oxobutanedioic acid | Oxalo...)
Show SMILES OC(=O)CC(=O)C(O)=O
Show InChI InChI=1S/C4H4O5/c5-2(4(8)9)1-3(6)7/h1H2,(H,6,7)(H,8,9)
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4.41E+5n/an/an/an/an/an/an/an/a



University of Waterloo



Assay Description
The inhibition of H477R PEPCK by β-sulfopyruvate (βSP), oxalate, and GMPPCP was conducted in the direction of PEP synthesis (OAA → PE...


Biochemistry 56: 2106-2115 (2017)


Article DOI: 10.1021/acs.biochem.7b00178
BindingDB Entry DOI: 10.7270/Q2D50KTV
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Phosphoenolpyruvate carboxykinase, cytosolic [GTP] [H477R]


(Rattus norvegicus (Rat))
BDBM223202
PNG
(β,γ-methyleneguanosine 5′-triphosp...)
Show SMILES Nc1nc([O-])c2ncn([C@@H]3O[C@H](COP(O)(=O)OP(O)(=O)C[P+](O)(O)[O-])[C@@H](O)[C@H]3O)c2n1
Show InChI InChI=1S/C11H18N5O13P3/c12-11-14-8-5(9(19)15-11)13-2-16(8)10-7(18)6(17)4(28-10)1-27-32(25,26)29-31(23,24)3-30(20,21)22/h2,4,6-7,10,17-18H,1,3H2,(H,23,24)(H,25,26)(H2,20,21,22)(H3,12,14,15,19)/p-1/t4-,6-,7-,10-/m1/s1
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6.96E+5n/an/an/an/an/an/an/an/a



University of Waterloo



Assay Description
The inhibition of H477R PEPCK by β-sulfopyruvate (βSP), oxalate, and GMPPCP was conducted in the direction of PEP synthesis (OAA → PE...


Biochemistry 56: 2106-2115 (2017)


Article DOI: 10.1021/acs.biochem.7b00178
BindingDB Entry DOI: 10.7270/Q2D50KTV
More data for this
Ligand-Target Pair
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM50133801
PNG
(CHEMBL120708 | N-(4-((1-(2-fluorobenzyl)-3-butyl-2...)
Show SMILES CCCCn1c2nc(Cc3ccc(NC(C)=O)cc3)[nH]c2c(=O)n(Cc2ccccc2F)c1=O
Show InChI InChI=1S/C25H26FN5O3/c1-3-4-13-30-23-22(24(33)31(25(30)34)15-18-7-5-6-8-20(18)26)28-21(29-23)14-17-9-11-19(12-10-17)27-16(2)32/h5-12H,3-4,13-15H2,1-2H3,(H,27,32)(H,28,29)
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n/an/an/an/a 8.60E+3n/an/an/an/a



Roche Research Center

Curated by ChEMBL


Assay Description
Inhibition of cPEPCK in rat H4IIE cells assessed as effect on glucose production


Bioorg Med Chem Lett 17: 3835-9 (2007)


Article DOI: 10.1016/j.bmcl.2007.05.013
BindingDB Entry DOI: 10.7270/Q2BV7HF1
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM50214004
PNG
(CHEMBL243116 | N-(4-((1-(2-fluorobenzyl)-3-butyl-2...)
Show SMILES CCCCn1c2nc(Cc3ccc(NS(=O)(=O)c4c(C)nn(C)c4Cl)cc3)[nH]c2c(=O)n(Cc2ccccc2F)c1=O
Show InChI InChI=1S/C28H29ClFN7O4S/c1-4-5-14-36-26-23(27(38)37(28(36)39)16-19-8-6-7-9-21(19)30)31-22(32-26)15-18-10-12-20(13-11-18)34-42(40,41)24-17(2)33-35(3)25(24)29/h6-13,34H,4-5,14-16H2,1-3H3,(H,31,32)
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n/an/an/an/a 3.97E+3n/an/an/an/a



Roche Research Center

Curated by ChEMBL


Assay Description
Inhibition of cPEPCK in rat H4IIE cells assessed as effect on glucose production


Bioorg Med Chem Lett 17: 3835-9 (2007)


Article DOI: 10.1016/j.bmcl.2007.05.013
BindingDB Entry DOI: 10.7270/Q2BV7HF1
More data for this
Ligand-Target Pair
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM50214012
PNG
(CHEMBL394368 | N-(4-((1-(2-fluorobenzyl)-3-(cyclop...)
Show SMILES Cc1noc(C)c1S(=O)(=O)Nc1ccc(Cc2nc3n(CC4CC4)c(=O)n(Cc4ccccc4F)c(=O)c3[nH]2)cc1
Show InChI InChI=1S/C28H27FN6O5S/c1-16-25(17(2)40-32-16)41(38,39)33-21-11-9-18(10-12-21)13-23-30-24-26(31-23)34(14-19-7-8-19)28(37)35(27(24)36)15-20-5-3-4-6-22(20)29/h3-6,9-12,19,33H,7-8,13-15H2,1-2H3,(H,30,31)
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n/an/an/an/a 3.40E+3n/an/an/an/a



Roche Research Center

Curated by ChEMBL


Assay Description
Inhibition of cPEPCK in rat H4IIE cells assessed as effect on glucose production


Bioorg Med Chem Lett 17: 3835-9 (2007)


Article DOI: 10.1016/j.bmcl.2007.05.013
BindingDB Entry DOI: 10.7270/Q2BV7HF1
More data for this
Ligand-Target Pair
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM50214013
PNG
(CHEMBL242486 | N-(4-((1-(2-fluorobenzyl)-3-(cyclop...)
Show SMILES Fc1ccccc1Cn1c(=O)n(CC2CC2)c2nc(Cc3ccc(NS(=O)(=O)c4cccnc4)cc3)[nH]c2c1=O
Show InChI InChI=1S/C28H25FN6O4S/c29-23-6-2-1-4-20(23)17-35-27(36)25-26(34(28(35)37)16-19-7-8-19)32-24(31-25)14-18-9-11-21(12-10-18)33-40(38,39)22-5-3-13-30-15-22/h1-6,9-13,15,19,33H,7-8,14,16-17H2,(H,31,32)
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n/an/an/an/a 5.50E+3n/an/an/an/a



Roche Research Center

Curated by ChEMBL


Assay Description
Inhibition of cPEPCK in rat H4IIE cells assessed as effect on glucose production


Bioorg Med Chem Lett 17: 3835-9 (2007)


Article DOI: 10.1016/j.bmcl.2007.05.013
BindingDB Entry DOI: 10.7270/Q2BV7HF1
More data for this
Ligand-Target Pair
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM50214016
PNG
(CHEMBL243342 | N-(4-((1-(2-fluorobenzyl)-3-(cyclop...)
Show SMILES Cc1nc(N)sc1S(=O)(=O)Nc1ccc(Cc2nc3n(CC4CC4)c(=O)n(Cc4ccccc4F)c(=O)c3[nH]2)cc1
Show InChI InChI=1S/C27H26FN7O4S2/c1-15-25(40-26(29)30-15)41(38,39)33-19-10-8-16(9-11-19)12-21-31-22-23(32-21)34(13-17-6-7-17)27(37)35(24(22)36)14-18-4-2-3-5-20(18)28/h2-5,8-11,17,33H,6-7,12-14H2,1H3,(H2,29,30)(H,31,32)
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n/an/an/an/a 8.20E+3n/an/an/an/a



Roche Research Center

Curated by ChEMBL


Assay Description
Inhibition of cPEPCK in rat H4IIE cells assessed as effect on glucose production


Bioorg Med Chem Lett 17: 3835-9 (2007)


Article DOI: 10.1016/j.bmcl.2007.05.013
BindingDB Entry DOI: 10.7270/Q2BV7HF1
More data for this
Ligand-Target Pair
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM50214010
PNG
(CHEMBL244165 | N-(4-((1-(2-fluorobenzyl)-3-(cyclop...)
Show SMILES CC(=O)Nc1ccc(Cc2nc3n(CC4CC4)c(=O)n(Cc4ccccc4F)c(=O)c3[nH]2)cc1
Show InChI InChI=1S/C25H24FN5O3/c1-15(32)27-19-10-8-16(9-11-19)12-21-28-22-23(29-21)30(13-17-6-7-17)25(34)31(24(22)33)14-18-4-2-3-5-20(18)26/h2-5,8-11,17H,6-7,12-14H2,1H3,(H,27,32)(H,28,29)
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n/an/an/an/a 4.70E+3n/an/an/an/a



Roche Research Center

Curated by ChEMBL


Assay Description
Inhibition of cPEPCK in rat H4IIE cells assessed as effect on glucose production


Bioorg Med Chem Lett 17: 3835-9 (2007)


Article DOI: 10.1016/j.bmcl.2007.05.013
BindingDB Entry DOI: 10.7270/Q2BV7HF1
More data for this
Ligand-Target Pair
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM50214001
PNG
(CHEMBL389494 | N-(4-((1-(2-fluorobenzyl)-3-(cyclop...)
Show SMILES Cc1nn(C)c(Cl)c1S(=O)(=O)Nc1ccc(Cc2nc3n(CC4CC4)c(=O)n(Cc4ccccc4F)c(=O)c3[nH]2)cc1
Show InChI InChI=1S/C28H27ClFN7O4S/c1-16-24(25(29)35(2)33-16)42(40,41)34-20-11-9-17(10-12-20)13-22-31-23-26(32-22)36(14-18-7-8-18)28(39)37(27(23)38)15-19-5-3-4-6-21(19)30/h3-6,9-12,18,34H,7-8,13-15H2,1-2H3,(H,31,32)
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n/an/an/an/a 2.17E+3n/an/an/an/a



Roche Research Center

Curated by ChEMBL


Assay Description
Inhibition of cPEPCK in rat H4IIE cells assessed as effect on glucose production


Bioorg Med Chem Lett 17: 3835-9 (2007)


Article DOI: 10.1016/j.bmcl.2007.05.013
BindingDB Entry DOI: 10.7270/Q2BV7HF1
More data for this
Ligand-Target Pair
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM50214003
PNG
(CHEMBL243134 | N-(4-((1-(2-fluorobenzyl)-3-(cyclop...)
Show SMILES Cn1cc(cn1)S(=O)(=O)Nc1ccc(Cc2nc3n(CC4CC4)c(=O)n(Cc4ccccc4F)c(=O)c3[nH]2)cc1
Show InChI InChI=1S/C27H26FN7O4S/c1-33-16-21(13-29-33)40(38,39)32-20-10-8-17(9-11-20)12-23-30-24-25(31-23)34(14-18-6-7-18)27(37)35(26(24)36)15-19-4-2-3-5-22(19)28/h2-5,8-11,13,16,18,32H,6-7,12,14-15H2,1H3,(H,30,31)
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Article
PubMed
n/an/an/an/a 8.75E+3n/an/an/an/a



Roche Research Center

Curated by ChEMBL


Assay Description
Inhibition of cPEPCK in rat H4IIE cells assessed as effect on glucose production


Bioorg Med Chem Lett 17: 3835-9 (2007)


Article DOI: 10.1016/j.bmcl.2007.05.013
BindingDB Entry DOI: 10.7270/Q2BV7HF1
More data for this
Ligand-Target Pair
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]


(Rattus norvegicus (Rat))
BDBM50214007
PNG
(CHEMBL394621 | N-(4-((1-(2-fluorobenzyl)-3-(cyclop...)
Show SMILES Cc1nn(C)cc1S(=O)(=O)Nc1ccc(Cc2nc3n(CC4CC4)c(=O)n(Cc4ccccc4F)c(=O)c3[nH]2)cc1
Show InChI InChI=1S/C28H28FN7O4S/c1-17-23(16-34(2)32-17)41(39,40)33-21-11-9-18(10-12-21)13-24-30-25-26(31-24)35(14-19-7-8-19)28(38)36(27(25)37)15-20-5-3-4-6-22(20)29/h3-6,9-12,16,19,33H,7-8,13-15H2,1-2H3,(H,30,31)
PDB

UniProtKB/SwissProt

B.MOAD
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Patents


Similars

Article
PubMed
n/an/an/an/a 5.57E+3n/an/an/an/a



Roche Research Center

Curated by ChEMBL


Assay Description
Inhibition of cPEPCK in rat H4IIE cells assessed as effect on glucose production


Bioorg Med Chem Lett 17: 3835-9 (2007)


Article DOI: 10.1016/j.bmcl.2007.05.013
BindingDB Entry DOI: 10.7270/Q2BV7HF1
More data for this
Ligand-Target Pair