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BDBM32657 benzamidine- based compound, 6

SMILES: N[C@H](C(c1ccccc1)c1ccccc1)C(=O)N1CCCC1C(=O)NCc1ccc(cc1)C(N)=N

InChI Key: InChIKey=ODAPDZPYLPTJOD-XSWBTSGESA-N

Data: 1 KI  4 ITC

PDB links: 1 PDB ID matches this monomer.

Find this compound or compounds like it in BindingDB or PDB:
   Substructure
Similarity at least:  must be >=0.5
Exact match

Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB

Found 1 hit for monomerid = 32657   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kcal/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Prothrombin


(Homo sapiens (Human))
BDBM32657
PNG
(benzamidine- based compound, 6)
Show SMILES N[C@H](C(c1ccccc1)c1ccccc1)C(=O)N1CCCC1C(=O)NCc1ccc(cc1)C(N)=N |r|
Show InChI InChI=1S/C28H31N5O2/c29-25(24(20-8-3-1-4-9-20)21-10-5-2-6-11-21)28(35)33-17-7-12-23(33)27(34)32-18-19-13-15-22(16-14-19)26(30)31/h1-6,8-11,13-16,23-25H,7,12,17-18,29H2,(H3,30,31)(H,32,34)/t23?,25-/m1/s1
PDB

UniProtKB/SwissProt

antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
PDB
UniChem

Similars

PDB
Article
PubMed
0.100 -13.6n/an/an/an/an/a7.425



Philipps-University Marburg



Assay Description
Kinetic inhibition of human thrombin was determined photometrically at 405 nm using the chromogenic substrate Pefachrom tPa. Reactions were performed...


J Mol Biol 391: 552-64 (2009)


Article DOI: 10.1016/j.jmb.2009.06.016
BindingDB Entry DOI: 10.7270/Q2RV0M1Z
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)

Activity Spreadsheet -- ITC Data from BindingDB

Found 4 hits for monomerid = 32657
Cell (A)Syringe (B)Cell
Links
Syringe
Links
Cell + Syr
Links
ΔG°
kcal/mole
-TΔS°
kcal/mole
ΔH°
kcal/mole
log KpHTemp
°C
Thrombin

(Homo sapiens (Human))
BDBM32657
JPEG
(benzamidine- based compound, 6)
GoogleScholar
PDB
PC cid
PC sid
PDB
-11.6-0.214-11.3n/a7.8025



Philipps-University Marburg





J Mol Biol 391: 552-64 (2009)

Thrombin

(Homo sapiens (Human))
BDBM32657
JPEG
(benzamidine- based compound, 6)
GoogleScholar
PDB
PC cid
PC sid
PDB
-11.3-0.812-10.5n/a7.8025



Philipps-University Marburg





J Mol Biol 391: 552-64 (2009)

Thrombin

(Homo sapiens (Human))
BDBM32657
JPEG
(benzamidine- based compound, 6)
GoogleScholar
PDB
PC cid
PC sid
PDB
-12.5-1.64-10.8n/a7.8025



Philipps-University Marburg





J Mol Biol 391: 552-64 (2009)

Thrombin

(Homo sapiens (Human))
BDBM32657
JPEG
(benzamidine- based compound, 6)
GoogleScholar
PDB
PC cid
PC sid
PDB
-11.1-1.36-9.74n/a7.8025



Philipps-University Marburg





J Mol Biol 391: 552-64 (2009)