BindingDB logo
myBDB logout

BDBM50026387 1-((2-HYDROXYETHOXY)METHYL)-5-BENZYLPYRIMIDINE-2,4(1H,3H)-DIONE::5-Benzyl-1-(2-hydroxy-ethoxymethyl)-1H-pyrimidine-2,4-dione::CHEMBL17432

SMILES: OCCOCn1cc(Cc2ccccc2)c(=O)[nH]c1=O

InChI Key: InChIKey=SPJAGILXQBHHSZ-UHFFFAOYSA-N

Data: 1 IC50  4 Kd

PDB links: 4 PDB IDs match this monomer.

Find this compound or compounds like it in BindingDB or PDB:
   Substructure
Similarity at least:  must be >=0.5
Exact match

Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB

Found 5 hits for monomerid = 50026387   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kcal/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Uridine phosphorylase 1


(Mus musculus)
BDBM50026387
PNG
(1-((2-HYDROXYETHOXY)METHYL)-5-BENZYLPYRIMIDINE-2,4...)
Show SMILES OCCOCn1cc(Cc2ccccc2)c(=O)[nH]c1=O
Show InChI InChI=1S/C14H16N2O4/c17-6-7-20-10-16-9-12(13(18)15-14(16)19)8-11-4-2-1-3-5-11/h1-5,9,17H,6-8,10H2,(H,15,18,19)
Reactome pathway
KEGG

UniProtKB/SwissProt
UniProtKB/TrEMBL

GoogleScholar
AffyNet 
Purchase

CHEMBL
DrugBank
MCE
MMDB
PC cid
PC sid
PDB
UniChem

Patents


Similars

PubMed
n/an/a 460n/an/an/an/an/an/a



Burroughs Wellcome Co.

Curated by ChEMBL


Assay Description
Inhibition of uridine phosphorylase (UrdPase) from murine liver.


J Med Chem 38: 3850-6 (1995)


BindingDB Entry DOI: 10.7270/Q2B27T91
More data for this
Ligand-Target Pair
Uridine phosphorylase 1


(Homo sapiens (Human))
BDBM50026387
PNG
(1-((2-HYDROXYETHOXY)METHYL)-5-BENZYLPYRIMIDINE-2,4...)
Show SMILES OCCOCn1cc(Cc2ccccc2)c(=O)[nH]c1=O
Show InChI InChI=1S/C14H16N2O4/c17-6-7-20-10-16-9-12(13(18)15-14(16)19)8-11-4-2-1-3-5-11/h1-5,9,17H,6-8,10H2,(H,15,18,19)
PDB

KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
Purchase

CHEMBL
DrugBank
MCE
MMDB
PC cid
PC sid
PDB
UniChem

Patents


Similars

PDB
Article
PubMed
n/an/an/a 6.60E+3n/an/an/an/an/a



Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS)

Curated by ChEMBL


Assay Description
Binding affinity to human recombinant UP1-R1P binary complex expressed in Escherichia coli Rosetta (DE3) at 150 uM R1P by isothermal titration calori...


J Med Chem 56: 8892-902 (2013)


Article DOI: 10.1021/jm401389u
BindingDB Entry DOI: 10.7270/Q2HX1F44
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Uridine phosphorylase 1


(Homo sapiens (Human))
BDBM50026387
PNG
(1-((2-HYDROXYETHOXY)METHYL)-5-BENZYLPYRIMIDINE-2,4...)
Show SMILES OCCOCn1cc(Cc2ccccc2)c(=O)[nH]c1=O
Show InChI InChI=1S/C14H16N2O4/c17-6-7-20-10-16-9-12(13(18)15-14(16)19)8-11-4-2-1-3-5-11/h1-5,9,17H,6-8,10H2,(H,15,18,19)
PDB

KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
Purchase

CHEMBL
DrugBank
MCE
MMDB
PC cid
PC sid
PDB
UniChem

Patents


Similars

PDB
Article
PubMed
n/an/an/a 1.20E+3n/an/an/an/an/a



Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS)

Curated by ChEMBL


Assay Description
Binding affinity to human recombinant UP1 expressed in Escherichia coli Rosetta (DE3) by isothermal titration calorimetric analysis


J Med Chem 56: 8892-902 (2013)


Article DOI: 10.1021/jm401389u
BindingDB Entry DOI: 10.7270/Q2HX1F44
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Uridine phosphorylase 1


(Homo sapiens (Human))
BDBM50026387
PNG
(1-((2-HYDROXYETHOXY)METHYL)-5-BENZYLPYRIMIDINE-2,4...)
Show SMILES OCCOCn1cc(Cc2ccccc2)c(=O)[nH]c1=O
Show InChI InChI=1S/C14H16N2O4/c17-6-7-20-10-16-9-12(13(18)15-14(16)19)8-11-4-2-1-3-5-11/h1-5,9,17H,6-8,10H2,(H,15,18,19)
PDB

KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
Purchase

CHEMBL
DrugBank
MCE
MMDB
PC cid
PC sid
PDB
UniChem

Patents


Similars

PDB
Article
PubMed
n/an/an/a 1.40E+3n/an/an/an/an/a



Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS)

Curated by ChEMBL


Assay Description
Binding affinity to human recombinant UP1-inorganic phosphate binary complex expressed in Escherichia coli Rosetta (DE3) by isothermal titration calo...


J Med Chem 56: 8892-902 (2013)


Article DOI: 10.1021/jm401389u
BindingDB Entry DOI: 10.7270/Q2HX1F44
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Uridine phosphorylase 1


(Homo sapiens (Human))
BDBM50026387
PNG
(1-((2-HYDROXYETHOXY)METHYL)-5-BENZYLPYRIMIDINE-2,4...)
Show SMILES OCCOCn1cc(Cc2ccccc2)c(=O)[nH]c1=O
Show InChI InChI=1S/C14H16N2O4/c17-6-7-20-10-16-9-12(13(18)15-14(16)19)8-11-4-2-1-3-5-11/h1-5,9,17H,6-8,10H2,(H,15,18,19)
PDB

KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
Purchase

CHEMBL
DrugBank
MCE
MMDB
PC cid
PC sid
PDB
UniChem

Patents


Similars

PDB
Article
PubMed
n/an/an/a 1.20E+3n/an/an/an/an/a



Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS)

Curated by ChEMBL


Assay Description
Binding affinity to human recombinant UP1-R1P binary complex expressed in Escherichia coli Rosetta (DE3) at 50 uM R1P by isothermal titration calorim...


J Med Chem 56: 8892-902 (2013)


Article DOI: 10.1021/jm401389u
BindingDB Entry DOI: 10.7270/Q2HX1F44
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)