2ZDA: Exploring Thrombin S1 pocket

PDB ID: 2ZDADownload
MMDB ID: 67592
PDB Deposition Date: 2007/11/21
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 1.73  Å
Source Organism:
Homo sapiens▼
Similar Structures:
Biological Unit for 2ZDA: trimeric; determined by author and by software (PISA)
Molecular Components in 2ZDA
Label Count Molecule
Proteins (3 molecules)
1
Thrombin Light Chain
Molecule annotation
1
Thrombin Heavy Chain
Molecule annotation
1
Hirudin Variant-1
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
2
SODIUM IONSODIUM ION
2
1
PHOSPHATE IONPHOSPHATE ION
3
1
D-phenylalanyl-N-{4-[amino(iminio)methyl]benzyl}-L-prolinamideD-phenylalanyl-N-{4-[amino(iminio)methyl]benzyl}-L-prolinamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303