2OGN: The crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-280080

PDB ID: 2OGNDownload
MMDB ID: 45518
PDB Deposition Date: 2007/1/7
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 3.56  Å
Source Organism:
Similar Structures:
Biological Unit for 2OGN: dimeric; determined by author
Molecular Components in 2OGN
Label Count Molecule
Protein (1 molecule)
1
50S Ribosomal Protein L3
(Gene symbol: rplC)
Molecule annotation
Nucleotide(1 molecule)
1
23S Ribosomal RNA
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
(3AS,4R,5S,6S,8R,9R,9AR,10R)-5-HYDROXY-4,6,9,10-TETRAMETHYL-1-OXO-6-VINYLDECAHYDRO-3A,9-PROPANOCYCLOPENTA[8]ANNULEN-8-YL (PIPERIDIN-4-YLTHIO)ACETATE(3AS,4R,5S,6S,8R,9R,9AR,10R)-5-HYDROXY-4,6,9,10-TETRAMETHYL-1-OXO-6-VINYLDECAHYDRO-3A,9-PROPANOCYCLOPENTA[8]ANNULEN-8-YL (PIPERIDIN-4-YLTHIO)ACETATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303