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2VMD:
Structure of the complex of discoidin II from Dictyostelium discoideum with beta-methyl-galactose
PDB ID:
2VMD
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MMDB ID:
65200
PDB Deposition Date:
2008/1/25
Updated in MMDB:
2023/12
Experimental Method:
x-ray diffraction
Resolution:
1.9 Å
Source Organism:
Dictyostelium discoideum AX2
Similar Structures:
VAST+
Download sequence data
Biological Unit for 2VMD: trimeric; determined by author and by software (PISA)
Molecular Components in 2VMD
Label
Count
Molecule
Proteins (3 molecules)
A
A_1
A_2
3
Discoidin-2
(Gene symbol:
dscE
)
Chemicals and Non-standard biopolymers (16 molecules)
1
1
CHLORIDE ION
2
3
CALCIUM ION
3
3
methyl beta-D-galactopyranoside
4
6
2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL
5
3
1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303