4J52: Crystal structure of PLK1 in complex with a pyrimidodiazepinone inhibitor

PDB ID: 4J52Download
MMDB ID: 110546
PDB Deposition Date: 2013/2/7
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 2.3  Å
Source Organism:
Similar Structures:
Biological Unit for 4J52: monomeric; determined by author
Molecular Components in 4J52
Label Count Molecule
Protein (1 molecule)
1
Serine/threonine-protein Kinase Plk1
(Gene symbol: PLK1)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
4-{[(7R)-9-cyclopentyl-7-ethenyl-7-fluoro-5-methyl-6-oxo-6,7,8,9-tetrahydro-5H-pyrimido[4,5-b][1,4]diazepin-2-yl]amino}-3-methoxy-N-(4-methylpiperazin-1-yl)benzamide4-{[(7R)-9-cyclopentyl-7-ethenyl-7-fluoro-5-methyl-6-oxo-6,7,8,9-tetrahydro-5H-pyrimido[4,5-b][1,4]diazepin-2-yl]amino}-3-methoxy-N-(4-methylpiperazin-1-yl)benzamide
2
1
ZINC IONZINC ION
3
1
ACETATE IONACETATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303