Structure-based design of beta-lactamase inhibitors. 1. Synthesis and evaluation of bridged monobactams

J Med Chem. 1998 Oct 8;41(21):3961-71. doi: 10.1021/jm980023c.

Abstract

Bridged monobactams are novel, potent, mechanism-based inhibitors of class C beta-lactamases, designed using X-ray crystal structures of the enzymes. They stabilize the acyl-enzyme intermediate by blocking access of water to the enzyme-inhibitor ester bond. Bridged monobactams are selective class C beta-lactamase inhibitors, with half-inhibition constants as low as 10 nM, and are less effective against class A and class B enzymes (half-inhibition constants > 100 microM) because of the different hydrolysis mechanisms in these classes of beta-lactamases. The stability of the acyl-enzyme complexes formed with class C beta-lactamases (half-lives up to 2 days were observed) enabled determination of their crystal structures. The conformation of the inhibitor moiety was close to that predicted by molecular modeling, confirming a simple reaction mechanism, unlike those of known beta-lactamase inhibitors such as clavulanic acid and penam sulfones, which involve secondary rearrangements. Synergy between the bridged monobactams and beta-lactamase-labile antibiotics could be observed when such combinations were tested against strains of Enterobacteriaceae that produce large amounts of class C beta-lactamases. The minimal inhibitory concentration of the antibiotic of more than 64 mg/L could be decreased to 0.25 mg/L in a 1:4 combination with the inhibitor.

MeSH terms

  • Acylation
  • Binding Sites
  • Ceftriaxone / pharmacology
  • Cephalosporins / pharmacology
  • Citrobacter freundii / drug effects
  • Citrobacter freundii / enzymology
  • Drug Design*
  • Drug Synergism
  • Enzyme Inhibitors / chemical synthesis*
  • Enzyme Inhibitors / metabolism
  • Enzyme Inhibitors / pharmacology
  • Escherichia coli / drug effects
  • Escherichia coli / enzymology
  • Kinetics
  • Models, Molecular
  • Molecular Conformation
  • Monobactams / chemical synthesis*
  • Monobactams / metabolism
  • Monobactams / pharmacology
  • Pseudomonas aeruginosa / drug effects
  • Pseudomonas aeruginosa / enzymology
  • beta-Lactam Resistance
  • beta-Lactamase Inhibitors*
  • beta-Lactamases / metabolism

Substances

  • Cephalosporins
  • Enzyme Inhibitors
  • Monobactams
  • beta-Lactamase Inhibitors
  • Ceftriaxone
  • beta-Lactamases