Structure-based drug design of a highly potent CDK1,2,4,6 inhibitor with novel macrocyclic quinoxalin-2-one structure

Bioorg Med Chem Lett. 2006 Oct 1;16(19):5122-6. doi: 10.1016/j.bmcl.2006.07.026. Epub 2006 Jul 28.

Abstract

The design of a novel series of cyclin-dependent kinase (CDK) inhibitors containing a macrocyclic quinoxaline-2-one is reported. Structure-based drug design and optimization from the starting point of diarylurea 2, which we previously reported as a moderate CDK1,2,4,6 inhibitor [J. Biol.Chem.2001, 276, 27548], led to the discovery of potent CDK1,2,4,6 inhibitor that were suitable for iv administration for in vivo study.

MeSH terms

  • Animals
  • Binding Sites
  • CDC2 Protein Kinase / antagonists & inhibitors
  • CDC2-CDC28 Kinases / antagonists & inhibitors*
  • Crystallography, X-Ray
  • Cyclin-Dependent Kinase 2 / antagonists & inhibitors
  • Cyclin-Dependent Kinase 4 / antagonists & inhibitors
  • Cyclin-Dependent Kinase 6 / antagonists & inhibitors
  • Drug Design
  • Humans
  • Hydrogen Bonding
  • Inhibitory Concentration 50
  • Macrocyclic Compounds / chemical synthesis
  • Macrocyclic Compounds / pharmacology
  • Molecular Structure
  • Quinoxalines / chemical synthesis*
  • Quinoxalines / pharmacology*
  • Structure-Activity Relationship

Substances

  • Macrocyclic Compounds
  • Quinoxalines
  • CDC2 Protein Kinase
  • CDC2-CDC28 Kinases
  • Cyclin-Dependent Kinase 2
  • Cyclin-Dependent Kinase 4
  • Cyclin-Dependent Kinase 6