BindingDB logo
myBDB logout
Compile Data Set for Download or QSAR

Found 3 hits Enz. Inhib. hit(s) with Target = 'Histone deacetylase 6' and Ligand = 'BDBM50302073'   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Histone deacetylase 6


(Homo sapiens (Human))
BDBM50302073
PNG
(6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-2-benz...)
Show SMILES CC(C)C[C@H]1CC(=O)N[C@@H](Cc2ccccc2)C(=O)N[C@@H](CCCCCC(=O)NO)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1 |r|
Show InChI InChI=1S/C35H46N6O6/c1-22(2)17-25-20-32(43)38-29(18-23-11-5-3-6-12-23)35(46)39-28(15-7-4-8-16-31(42)41-47)33(44)40-30(34(45)37-25)19-24-21-36-27-14-10-9-13-26(24)27/h3,5-6,9-14,21-22,25,28-30,36,47H,4,7-8,15-20H2,1-2H3,(H,37,45)(H,38,43)(H,39,46)(H,40,44)(H,41,42)/t25-,28-,29-,30-/m0/s1
PDB
MMDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a 70n/an/an/an/an/an/a



The Scripps Research Institute

Curated by ChEMBL


Assay Description
Inhibition of human recombinant HDAC6 after 30 mins by fluorimetric assay


J Med Chem 52: 7836-46 (2009)


Article DOI: 10.1021/jm900850t
BindingDB Entry DOI: 10.7270/Q2M046DK
More data for this
Ligand-Target Pair
Histone deacetylase 6


(Homo sapiens (Human))
BDBM50302073
PNG
(6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-2-benz...)
Show SMILES CC(C)C[C@H]1CC(=O)N[C@@H](Cc2ccccc2)C(=O)N[C@@H](CCCCCC(=O)NO)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1 |r|
Show InChI InChI=1S/C35H46N6O6/c1-22(2)17-25-20-32(43)38-29(18-23-11-5-3-6-12-23)35(46)39-28(15-7-4-8-16-31(42)41-47)33(44)40-30(34(45)37-25)19-24-21-36-27-14-10-9-13-26(24)27/h3,5-6,9-14,21-22,25,28-30,36,47H,4,7-8,15-20H2,1-2H3,(H,37,45)(H,38,43)(H,39,46)(H,40,44)(H,41,42)/t25-,28-,29-,30-/m0/s1
PDB
MMDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a 70n/an/an/an/an/an/a



Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, CA, USA; National Yang-Ming University, Taipei, Taiwan; National Yang-Ming University Hospital, Ilan, Taiwan.

Curated by ChEMBL


Assay Description
Inhibition of HDAC6 (unknown origin)


Bioorg Med Chem Lett 27: 3289-3293 (2017)


Article DOI: 10.1016/j.bmcl.2017.06.027
BindingDB Entry DOI: 10.7270/Q2Z32238
More data for this
Ligand-Target Pair
Histone deacetylase 6


(Homo sapiens (Human))
BDBM50302073
PNG
(6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-2-benz...)
Show SMILES CC(C)C[C@H]1CC(=O)N[C@@H](Cc2ccccc2)C(=O)N[C@@H](CCCCCC(=O)NO)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1 |r|
Show InChI InChI=1S/C35H46N6O6/c1-22(2)17-25-20-32(43)38-29(18-23-11-5-3-6-12-23)35(46)39-28(15-7-4-8-16-31(42)41-47)33(44)40-30(34(45)37-25)19-24-21-36-27-14-10-9-13-26(24)27/h3,5-6,9-14,21-22,25,28-30,36,47H,4,7-8,15-20H2,1-2H3,(H,37,45)(H,38,43)(H,39,46)(H,40,44)(H,41,42)/t25-,28-,29-,30-/m0/s1
PDB
MMDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a 70n/an/an/an/an/an/a



TBA

Curated by ChEMBL


Assay Description
Inhibition of HDAC6 in human HeLa cells nuclear extract using Fluor-de-Lys as substrate after 30 mins by spectrophotometry


ACS Med Chem Lett 2: 703-707 (2011)


Article DOI: 10.1021/ml200136e
BindingDB Entry DOI: 10.7270/Q2GQ6ZRX
More data for this
Ligand-Target Pair