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Compile Data Set for Download or QSAR

Found 16 hits with Last Name = 'upadhyay' and Initial = 'ak'   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
SET domain-containing protein 8 (SetD8)


(Homo sapiens (Human))
BDBM50201571
PNG
(CHEMBL3934996)
Show SMILES CCCCC(NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@H](Cc1cnc[nH]1)NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@H](CCCCN)NC(C)=O)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCNC(N)=N)C(O)=O |r|
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50n/an/an/an/an/an/an/an/a



AbbVie Inc.

Curated by ChEMBL


Assay Description
Competitive inhibition of human SETD8 (186 to 352 residues) using biotin-labeled H4K20 (1 to 24 residues) as substrate after 1 hr in presence of 3H-S...


ACS Med Chem Lett 7: 1102-1106 (2016)


Article DOI: 10.1021/acsmedchemlett.6b00303
BindingDB Entry DOI: 10.7270/Q2319XVP
More data for this
Ligand-Target Pair
SET domain-containing protein 8 (SetD8)


(Homo sapiens (Human))
BDBM50051116
PNG
(CHEMBL3318284)
Show SMILES [H][C@]12[C@@H](C)[C@H](O)C[C@@H](O)[C@@]1(C)C=C(C)[C@H]([C@@H]2\C=C(/C)C(O)=O)C(C)=CC[C@H](O)C[C@@H](O)[C@H](C)[C@@H](O)C(C)C |r,t:12|
Show InChI InChI=1/C30H50O7/c1-15(2)28(35)20(7)23(32)12-21(31)10-9-16(3)26-18(5)14-30(8)25(34)13-24(33)19(6)27(30)22(26)11-17(4)29(36)37/h9,11,14-15,19-28,31-35H,10,12-13H2,1-8H3,(H,36,37)/b16-9+,17-11+/t19-,20-,21-,22-,23+,24+,25+,26+,27+,28-,30+/s2
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2.00E+3n/an/an/an/an/an/an/an/a



AbbVie Inc.

Curated by ChEMBL


Assay Description
Competitive inhibition of SETD8 (unknown origin) using biotin-labeled H4 (1 to 24 residues) as substrate after 1 hr in presence of varying levels of ...


ACS Med Chem Lett 7: 1102-1106 (2016)


Article DOI: 10.1021/acsmedchemlett.6b00303
BindingDB Entry DOI: 10.7270/Q2319XVP
More data for this
Ligand-Target Pair
Amine oxidase [flavin-containing] B


(Homo sapiens (Human))
BDBM92963
PNG
(ParSL)
Show SMILES CN(CC#C)Cc1ccc(CC(=O)NC2CC(C)(C)N([O-])C(C)(C)C2)cc1
Show InChI InChI=1S/C22H32N3O2/c1-7-12-24(6)16-18-10-8-17(9-11-18)13-20(26)23-19-14-21(2,3)25(27)22(4,5)15-19/h1,8-11,19H,12-16H2,2-6H3,(H,23,26)/q-1
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2.20E+4n/an/an/an/an/an/an/an/a



Emory University



Assay Description
Competitive inhibition assay using human and rat MAOs.


Biochemistry 47: 526-36 (2008)


Article DOI: 10.1021/bi7019707
BindingDB Entry DOI: 10.7270/Q24M934H
More data for this
Ligand-Target Pair
Monoamine Oxidase Type B (MAO-B)


(Rattus norvegicus (rat))
BDBM92963
PNG
(ParSL)
Show SMILES CN(CC#C)Cc1ccc(CC(=O)NC2CC(C)(C)N([O-])C(C)(C)C2)cc1
Show InChI InChI=1S/C22H32N3O2/c1-7-12-24(6)16-18-10-8-17(9-11-18)13-20(26)23-19-14-21(2,3)25(27)22(4,5)15-19/h1,8-11,19H,12-16H2,2-6H3,(H,23,26)/q-1
PDB
MMDB

KEGG

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1.07E+5n/an/an/an/an/an/an/an/a



Emory University



Assay Description
Competitive inhibition assay using human and rat MAOs.


Biochemistry 47: 526-36 (2008)


Article DOI: 10.1021/bi7019707
BindingDB Entry DOI: 10.7270/Q24M934H
More data for this
Ligand-Target Pair
Monoamine oxidase


(Rattus norvegicus (rat))
BDBM92963
PNG
(ParSL)
Show SMILES CN(CC#C)Cc1ccc(CC(=O)NC2CC(C)(C)N([O-])C(C)(C)C2)cc1
Show InChI InChI=1S/C22H32N3O2/c1-7-12-24(6)16-18-10-8-17(9-11-18)13-20(26)23-19-14-21(2,3)25(27)22(4,5)15-19/h1,8-11,19H,12-16H2,2-6H3,(H,23,26)/q-1
PDB
MMDB

UniProtKB/SwissProt

B.MOAD
DrugBank
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UniChem
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1.51E+5n/an/an/an/an/an/an/an/a



Emory University



Assay Description
Competitive inhibition assay using human and rat MAOs.


Biochemistry 47: 526-36 (2008)


Article DOI: 10.1021/bi7019707
BindingDB Entry DOI: 10.7270/Q24M934H
More data for this
Ligand-Target Pair
Amine oxidase [flavin-containing] A


(Homo sapiens (Human))
BDBM92963
PNG
(ParSL)
Show SMILES CN(CC#C)Cc1ccc(CC(=O)NC2CC(C)(C)N([O-])C(C)(C)C2)cc1
Show InChI InChI=1S/C22H32N3O2/c1-7-12-24(6)16-18-10-8-17(9-11-18)13-20(26)23-19-14-21(2,3)25(27)22(4,5)15-19/h1,8-11,19H,12-16H2,2-6H3,(H,23,26)/q-1
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2.12E+5n/an/an/an/an/an/an/an/a



Emory University



Assay Description
Competitive inhibition assay using human and rat MAOs.


Biochemistry 47: 526-36 (2008)


Article DOI: 10.1021/bi7019707
BindingDB Entry DOI: 10.7270/Q24M934H
More data for this
Ligand-Target Pair
Protein lysine methyltransferase SUV4-20H1 (SUV4-20H1)


(Homo sapiens (Human))
BDBM223981
PNG
(6,7-Dichloro-N-cyclopentyl-4-(pyridin-4-yl)phthala...)
Show SMILES Clc1cc2c(NC3CCCC3)nnc(-c3ccncc3)c2cc1Cl
Show InChI InChI=1S/C18H16Cl2N4/c19-15-9-13-14(10-16(15)20)18(22-12-3-1-2-4-12)24-23-17(13)11-5-7-21-8-6-11/h5-10,12H,1-4H2,(H,22,24)
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n/an/a 25n/an/an/an/a8.025



AbbVie



Assay Description
Experiments were performed in triplicate at room temperature with 1 h incubation of 10 μl reaction mixture in buffer of 20 mM Tris-HCl, pH 8.0, ...


Nat Chem Biol 13: 317-324 (2017)


Article DOI: 10.1038/nchembio.2282
BindingDB Entry DOI: 10.7270/Q2X065XF
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
Protein lysine methyltransferase SUV4-20H2 (SUV4-20H2)


(Homo sapiens (Human))
BDBM223981
PNG
(6,7-Dichloro-N-cyclopentyl-4-(pyridin-4-yl)phthala...)
Show SMILES Clc1cc2c(NC3CCCC3)nnc(-c3ccncc3)c2cc1Cl
Show InChI InChI=1S/C18H16Cl2N4/c19-15-9-13-14(10-16(15)20)18(22-12-3-1-2-4-12)24-23-17(13)11-5-7-21-8-6-11/h5-10,12H,1-4H2,(H,22,24)
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n/an/a 144n/an/an/an/a8.025



AbbVie



Assay Description
Experiments were performed in triplicate at room temperature with 1 h incubation of 10 μl reaction mixture in buffer of 20 mM Tris-HCl, pH 8.0, ...


Nat Chem Biol 13: 317-324 (2017)


Article DOI: 10.1038/nchembio.2282
BindingDB Entry DOI: 10.7270/Q2X065XF
More data for this
Ligand-Target Pair
SET domain-containing protein 8 (SetD8)


(Homo sapiens (Human))
BDBM50201571
PNG
(CHEMBL3934996)
Show SMILES CCCCC(NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@H](Cc1cnc[nH]1)NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@H](CCCCN)NC(C)=O)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCNC(N)=N)C(O)=O |r|
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n/an/a 330n/an/an/an/an/an/a



AbbVie Inc.

Curated by ChEMBL


Assay Description
Inhibition of human SETD8 (186 to 352 residues) using biotin-labeled H4K20 (1 to 24 residues) as substrate after 1 hr in presence of 3H-SAM by scinti...


ACS Med Chem Lett 7: 1102-1106 (2016)


Article DOI: 10.1021/acsmedchemlett.6b00303
BindingDB Entry DOI: 10.7270/Q2319XVP
More data for this
Ligand-Target Pair
Protein lysine methyltransferase SUV4-20H1 (SUV4-20H1)


(Homo sapiens (Human))
BDBM223980
PNG
(6,7-Dichloro-N-cyclopentylquinolin-4-amine (2))
Show SMILES Clc1cc2nccc(NC3CCCC3)c2cc1Cl
Show InChI InChI=1S/C14H14Cl2N2/c15-11-7-10-13(18-9-3-1-2-4-9)5-6-17-14(10)8-12(11)16/h5-9H,1-4H2,(H,17,18)
PDB

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n/an/a 590n/an/an/an/a8.025



AbbVie



Assay Description
Experiments were performed in triplicate at room temperature with 1 h incubation of 10 μl reaction mixture in buffer of 20 mM Tris-HCl, pH 8.0, ...


Nat Chem Biol 13: 317-324 (2017)


Article DOI: 10.1038/nchembio.2282
BindingDB Entry DOI: 10.7270/Q2X065XF
More data for this
Ligand-Target Pair
Protein lysine methyltransferase SUV4-20H2 (SUV4-20H2)


(Homo sapiens (Human))
BDBM223980
PNG
(6,7-Dichloro-N-cyclopentylquinolin-4-amine (2))
Show SMILES Clc1cc2nccc(NC3CCCC3)c2cc1Cl
Show InChI InChI=1S/C14H14Cl2N2/c15-11-7-10-13(18-9-3-1-2-4-9)5-6-17-14(10)8-12(11)16/h5-9H,1-4H2,(H,17,18)
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UniProtKB/SwissProt

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n/an/a 1.20E+3n/an/an/an/a8.025



AbbVie



Assay Description
Experiments were performed in triplicate at room temperature with 1 h incubation of 10 μl reaction mixture in buffer of 20 mM Tris-HCl, pH 8.0, ...


Nat Chem Biol 13: 317-324 (2017)


Article DOI: 10.1038/nchembio.2282
BindingDB Entry DOI: 10.7270/Q2X065XF
More data for this
Ligand-Target Pair
Protein lysine methyltransferase SUV4-20H2 (SUV4-20H2)


(Homo sapiens (Human))
BDBM223979
PNG
(7-Chloro-N-cyclopentylquinolin-4-amine (1))
Show SMILES Clc1ccc2c(NC3CCCC3)ccnc2c1
Show InChI InChI=1S/C14H15ClN2/c15-10-5-6-12-13(7-8-16-14(12)9-10)17-11-3-1-2-4-11/h5-9,11H,1-4H2,(H,16,17)
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n/an/a 4.80E+3n/an/an/an/a8.025



AbbVie



Assay Description
Experiments were performed in triplicate at room temperature with 1 h incubation of 10 μl reaction mixture in buffer of 20 mM Tris-HCl, pH 8.0, ...


Nat Chem Biol 13: 317-324 (2017)


Article DOI: 10.1038/nchembio.2282
BindingDB Entry DOI: 10.7270/Q2X065XF
More data for this
Ligand-Target Pair
Protein lysine methyltransferase SUV4-20H1 (SUV4-20H1)


(Homo sapiens (Human))
BDBM223979
PNG
(7-Chloro-N-cyclopentylquinolin-4-amine (1))
Show SMILES Clc1ccc2c(NC3CCCC3)ccnc2c1
Show InChI InChI=1S/C14H15ClN2/c15-10-5-6-12-13(7-8-16-14(12)9-10)17-11-3-1-2-4-11/h5-9,11H,1-4H2,(H,16,17)
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n/an/a 5.90E+3n/an/an/an/a8.025



AbbVie



Assay Description
Experiments were performed in triplicate at room temperature with 1 h incubation of 10 μl reaction mixture in buffer of 20 mM Tris-HCl, pH 8.0, ...


Nat Chem Biol 13: 317-324 (2017)


Article DOI: 10.1038/nchembio.2282
BindingDB Entry DOI: 10.7270/Q2X065XF
More data for this
Ligand-Target Pair
SET domain-containing protein 8 (SetD8)


(Homo sapiens (Human))
BDBM50051116
PNG
(CHEMBL3318284)
Show SMILES [H][C@]12[C@@H](C)[C@H](O)C[C@@H](O)[C@@]1(C)C=C(C)[C@H]([C@@H]2\C=C(/C)C(O)=O)C(C)=CC[C@H](O)C[C@@H](O)[C@H](C)[C@@H](O)C(C)C |r,t:12|
Show InChI InChI=1/C30H50O7/c1-15(2)28(35)20(7)23(32)12-21(31)10-9-16(3)26-18(5)14-30(8)25(34)13-24(33)19(6)27(30)22(26)11-17(4)29(36)37/h9,11,14-15,19-28,31-35H,10,12-13H2,1-8H3,(H,36,37)/b16-9+,17-11+/t19-,20-,21-,22-,23+,24+,25+,26+,27+,28-,30+/s2
PDB

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n/an/a 6.50E+3n/an/an/an/an/an/a



AbbVie Inc.

Curated by ChEMBL


Assay Description
Inhibition of SETD8 (unknown origin) using biotin-labeled H4 (1 to 24 residues) as substrate after 1 hr in presence of [3H]SAM by scintillation proxi...


ACS Med Chem Lett 7: 1102-1106 (2016)


Article DOI: 10.1021/acsmedchemlett.6b00303
BindingDB Entry DOI: 10.7270/Q2319XVP
More data for this
Ligand-Target Pair
Protein lysine methyltransferase SUV4-20H2 (SUV4-20H2)


(Homo sapiens (Human))
BDBM223982
PNG
((6,7-Dichloro-4-(cyclopentylamino)phthalazin-1-yl)...)
Show SMILES OC1CCN(CC1)C(=O)c1nnc(NC2CCCC2)c2cc(Cl)c(Cl)cc12
Show InChI InChI=1S/C19H22Cl2N4O2/c20-15-9-13-14(10-16(15)21)18(22-11-3-1-2-4-11)24-23-17(13)19(27)25-7-5-12(26)6-8-25/h9-12,26H,1-8H2,(H,22,24)
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n/an/a>1.00E+4n/an/an/an/a8.025



AbbVie



Assay Description
Experiments were performed in triplicate at room temperature with 1 h incubation of 10 μl reaction mixture in buffer of 20 mM Tris-HCl, pH 8.0, ...


Nat Chem Biol 13: 317-324 (2017)


Article DOI: 10.1038/nchembio.2282
BindingDB Entry DOI: 10.7270/Q2X065XF
More data for this
Ligand-Target Pair
Protein lysine methyltransferase SUV4-20H1 (SUV4-20H1)


(Homo sapiens (Human))
BDBM223982
PNG
((6,7-Dichloro-4-(cyclopentylamino)phthalazin-1-yl)...)
Show SMILES OC1CCN(CC1)C(=O)c1nnc(NC2CCCC2)c2cc(Cl)c(Cl)cc12
Show InChI InChI=1S/C19H22Cl2N4O2/c20-15-9-13-14(10-16(15)21)18(22-11-3-1-2-4-11)24-23-17(13)19(27)25-7-5-12(26)6-8-25/h9-12,26H,1-8H2,(H,22,24)
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n/an/a>1.00E+4n/an/an/an/a8.025



AbbVie



Assay Description
Experiments were performed in triplicate at room temperature with 1 h incubation of 10 μl reaction mixture in buffer of 20 mM Tris-HCl, pH 8.0, ...


Nat Chem Biol 13: 317-324 (2017)


Article DOI: 10.1038/nchembio.2282
BindingDB Entry DOI: 10.7270/Q2X065XF
More data for this
Ligand-Target Pair