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PubMed code 20139990

Compile data set for download or QSAR
Found 8 hits of Enzyme Inhibition Constant Data   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Histone deacetylase 4


(Homo sapiens (Human))
BDBM36484
PNG
((S)-Benzyl (6-acetamido-1-((4-methyl-2-oxo-2H-chro...)
Show SMILES CC(=O)NCCCC[C@H](NC(=O)OCc1ccccc1)C(=O)Nc1ccc2c(C)cc(=O)oc2c1
Show InChI InChI=1S/C26H29N3O6/c1-17-14-24(31)35-23-15-20(11-12-21(17)23)28-25(32)22(10-6-7-13-27-18(2)30)29-26(33)34-16-19-8-4-3-5-9-19/h3-5,8-9,11-12,14-15,22H,6-7,10,13,16H2,1-2H3,(H,27,30)(H,28,32)(H,29,33)/t22-/m0/s1
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UniChem
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n/an/a 643n/an/an/an/a7.40



Dana-Farber Cancer Institute



Assay Description
For the enzyme assay, the enzyme fraction was added to fluorescent substrate in the presence of test compounds, and the mixture was incubated for add...


Nat Chem Biol 6: 238-243 (2010)


Article DOI: 10.1038/nchembio.313
More data for this
Ligand-Target Pair
Histone deacetylase 7


(Homo sapiens (Human))
BDBM36484
PNG
((S)-Benzyl (6-acetamido-1-((4-methyl-2-oxo-2H-chro...)
Show SMILES CC(=O)NCCCC[C@H](NC(=O)OCc1ccccc1)C(=O)Nc1ccc2c(C)cc(=O)oc2c1
Show InChI InChI=1S/C26H29N3O6/c1-17-14-24(31)35-23-15-20(11-12-21(17)23)28-25(32)22(10-6-7-13-27-18(2)30)29-26(33)34-16-19-8-4-3-5-9-19/h3-5,8-9,11-12,14-15,22H,6-7,10,13,16H2,1-2H3,(H,27,30)(H,28,32)(H,29,33)/t22-/m0/s1
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UniChem
Article
PubMed
n/an/a 786n/an/an/an/a7.40



Dana-Farber Cancer Institute



Assay Description
For the enzyme assay, the enzyme fraction was added to fluorescent substrate in the presence of test compounds, and the mixture was incubated for add...


Nat Chem Biol 6: 238-243 (2010)


Article DOI: 10.1038/nchembio.313
More data for this
Ligand-Target Pair
Histone deacetylase 9


(Homo sapiens (Human))
BDBM36484
PNG
((S)-Benzyl (6-acetamido-1-((4-methyl-2-oxo-2H-chro...)
Show SMILES CC(=O)NCCCC[C@H](NC(=O)OCc1ccccc1)C(=O)Nc1ccc2c(C)cc(=O)oc2c1
Show InChI InChI=1S/C26H29N3O6/c1-17-14-24(31)35-23-15-20(11-12-21(17)23)28-25(32)22(10-6-7-13-27-18(2)30)29-26(33)34-16-19-8-4-3-5-9-19/h3-5,8-9,11-12,14-15,22H,6-7,10,13,16H2,1-2H3,(H,27,30)(H,28,32)(H,29,33)/t22-/m0/s1
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n/an/a 1.02E+3n/an/an/an/a7.40



Dana-Farber Cancer Institute



Assay Description
For the enzyme assay, the enzyme fraction was added to fluorescent substrate in the presence of test compounds, and the mixture was incubated for add...


Nat Chem Biol 6: 238-243 (2010)


Article DOI: 10.1038/nchembio.313
More data for this
Ligand-Target Pair
Histone deacetylase 4


(Homo sapiens (Human))
BDBM36483
PNG
((S)-6-acetamido-2-(2-((S)-2-acetamido-4-methylpent...)
Show SMILES CC(C)C[C@H](NC(C)=O)C(=O)NCC(=O)N[C@@H](CCCCNC(C)=O)C(=O)Nc1ccc2c(C)cc(=O)oc2c1
Show InChI InChI=1S/C28H39N5O7/c1-16(2)12-23(31-19(5)35)27(38)30-15-25(36)33-22(8-6-7-11-29-18(4)34)28(39)32-20-9-10-21-17(3)13-26(37)40-24(21)14-20/h9-10,13-14,16,22-23H,6-8,11-12,15H2,1-5H3,(H,29,34)(H,30,38)(H,31,35)(H,32,39)(H,33,36)/t22-,23-/m0/s1
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UniChem
Article
PubMed
n/an/a 1.18E+3n/an/an/an/a7.40



Dana-Farber Cancer Institute



Assay Description
For the enzyme assay, the enzyme fraction was added to fluorescent substrate in the presence of test compounds, and the mixture was incubated for add...


Nat Chem Biol 6: 238-243 (2010)


Article DOI: 10.1038/nchembio.313
More data for this
Ligand-Target Pair
Histone deacetylase 7


(Homo sapiens (Human))
BDBM36483
PNG
((S)-6-acetamido-2-(2-((S)-2-acetamido-4-methylpent...)
Show SMILES CC(C)C[C@H](NC(C)=O)C(=O)NCC(=O)N[C@@H](CCCCNC(C)=O)C(=O)Nc1ccc2c(C)cc(=O)oc2c1
Show InChI InChI=1S/C28H39N5O7/c1-16(2)12-23(31-19(5)35)27(38)30-15-25(36)33-22(8-6-7-11-29-18(4)34)28(39)32-20-9-10-21-17(3)13-26(37)40-24(21)14-20/h9-10,13-14,16,22-23H,6-8,11-12,15H2,1-5H3,(H,29,34)(H,30,38)(H,31,35)(H,32,39)(H,33,36)/t22-,23-/m0/s1
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Article
PubMed
n/an/a 1.29E+3n/an/an/an/a7.40



Dana-Farber Cancer Institute



Assay Description
For the enzyme assay, the enzyme fraction was added to fluorescent substrate in the presence of test compounds, and the mixture was incubated for add...


Nat Chem Biol 6: 238-243 (2010)


Article DOI: 10.1038/nchembio.313
More data for this
Ligand-Target Pair
Histone deacetylase 5


(Homo sapiens (Human))
BDBM36484
PNG
((S)-Benzyl (6-acetamido-1-((4-methyl-2-oxo-2H-chro...)
Show SMILES CC(=O)NCCCC[C@H](NC(=O)OCc1ccccc1)C(=O)Nc1ccc2c(C)cc(=O)oc2c1
Show InChI InChI=1S/C26H29N3O6/c1-17-14-24(31)35-23-15-20(11-12-21(17)23)28-25(32)22(10-6-7-13-27-18(2)30)29-26(33)34-16-19-8-4-3-5-9-19/h3-5,8-9,11-12,14-15,22H,6-7,10,13,16H2,1-2H3,(H,27,30)(H,28,32)(H,29,33)/t22-/m0/s1
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n/an/a 1.31E+3n/an/an/an/a7.40



Dana-Farber Cancer Institute



Assay Description
For the enzyme assay, the enzyme fraction was added to fluorescent substrate in the presence of test compounds, and the mixture was incubated for add...


Nat Chem Biol 6: 238-243 (2010)


Article DOI: 10.1038/nchembio.313
More data for this
Ligand-Target Pair
Histone deacetylase 9


(Homo sapiens (Human))
BDBM36483
PNG
((S)-6-acetamido-2-(2-((S)-2-acetamido-4-methylpent...)
Show SMILES CC(C)C[C@H](NC(C)=O)C(=O)NCC(=O)N[C@@H](CCCCNC(C)=O)C(=O)Nc1ccc2c(C)cc(=O)oc2c1
Show InChI InChI=1S/C28H39N5O7/c1-16(2)12-23(31-19(5)35)27(38)30-15-25(36)33-22(8-6-7-11-29-18(4)34)28(39)32-20-9-10-21-17(3)13-26(37)40-24(21)14-20/h9-10,13-14,16,22-23H,6-8,11-12,15H2,1-5H3,(H,29,34)(H,30,38)(H,31,35)(H,32,39)(H,33,36)/t22-,23-/m0/s1
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n/an/a 2.34E+3n/an/an/an/a7.40



Dana-Farber Cancer Institute



Assay Description
For the enzyme assay, the enzyme fraction was added to fluorescent substrate in the presence of test compounds, and the mixture was incubated for add...


Nat Chem Biol 6: 238-243 (2010)


Article DOI: 10.1038/nchembio.313
More data for this
Ligand-Target Pair
Histone deacetylase 5


(Homo sapiens (Human))
BDBM36483
PNG
((S)-6-acetamido-2-(2-((S)-2-acetamido-4-methylpent...)
Show SMILES CC(C)C[C@H](NC(C)=O)C(=O)NCC(=O)N[C@@H](CCCCNC(C)=O)C(=O)Nc1ccc2c(C)cc(=O)oc2c1
Show InChI InChI=1S/C28H39N5O7/c1-16(2)12-23(31-19(5)35)27(38)30-15-25(36)33-22(8-6-7-11-29-18(4)34)28(39)32-20-9-10-21-17(3)13-26(37)40-24(21)14-20/h9-10,13-14,16,22-23H,6-8,11-12,15H2,1-5H3,(H,29,34)(H,30,38)(H,31,35)(H,32,39)(H,33,36)/t22-,23-/m0/s1
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PC cid
PC sid
UniChem
Article
PubMed
n/an/a 3.04E+3n/an/an/an/a7.40



Dana-Farber Cancer Institute



Assay Description
For the enzyme assay, the enzyme fraction was added to fluorescent substrate in the presence of test compounds, and the mixture was incubated for add...


Nat Chem Biol 6: 238-243 (2010)


Article DOI: 10.1038/nchembio.313
More data for this
Ligand-Target Pair
* indicates data uncertainty>20%