Reaction Details | |||
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Cell Reactant: | Transcriptional Regulator TtgR-DNA | ||
Syringe Reactant: | BDBM19461 | ||
Meas. Tech.: | Isothermal Titration Calorimetry | ||
Entry Date: | 07/23/08 | ||
ΔG°: | -29.1±0.0836 (kJ/mole) | ||
pH: | 7±n/a | ||
Log10Kb: | 5.03± 3.48 | ||
Temperature: | 303.15±n/a (K) | ||
ΔH° : | n/a | ||
ΔHobs : | -59.4±0.711 (kJ/mole) | ||
Ionic Strength: | n/a | ||
no | |||
Protons Released: | n/a | ||
ΔCp : | n/a | ||
Stoich. Param.: | n/a | ||
ΔS° : | -0.0997±0.00290 (kJ/mole-K) | ||
Comments: | n/a | ||
Citation | Terán, W; Krell, T; Ramos, JL; Gallegos, MT Effector-repressor interactions, binding of a single effector molecule to the operator-bound TtgR homodimer mediates derepression. J Biol Chem281:7102-9 (2006) [PubMed] Article | ||
More Info.: | Get all data from this article , ITC RUN data , Solution Info , Data Fit Method , Instrument Info | ||
Transcriptional Regulator TtgR-DNA | |||
Source: | TtgR protein was over-expressed and purified from E. coli. DNA fragment was obtained by annealing two complementary oligonucleotides. | ||
Purity: | n/a | ||
Prep. Method: | Purified TtgR was placed into the ITC cell and titrated by the addition of the 40-bp DNA fragment. The completeness of protein saturation with DNA was verified by polyacrylamide gel electrophoresis. | ||
Name: | Transcriptional Regulator TtgR-DNA | ||
Synonyms: | n/a | ||
Type: | DNA Complex | ||
Mol. Mass.: | n/a | ||
Description: | n/a | ||
Components: | This complex has 2 components. | ||
Component 1 | |||
Name: | Transcriptional Regulator TtgR | ||
Synonyms: | HTH-type transcriptional regulator ttgR | TTGR_PSEPT | Toluene efflux pump ttgABC operon repressor | ttgR | ||
Type: | Repressor; homodimer | ||
Mol. Mass.: | 23852.57 | ||
Organism: | Pseudomonas putida | ||
Description: | n/a | ||
Residue: | 210 | ||
Sequence: |
| ||
Component 2 | |||
Name: | TtgR Operator-Containing DNA Fragment | ||
Synonyms: | n/a | ||
Type: | Duplex DNA | ||
Mol. Mass.: | 3377.80 | ||
Organism: | n/a | ||
Description: | n/a | ||
Residue: | 40 | ||
Sequence: |
| ||
BDBM19461 | |||
Source: | n/a | ||
Purity: | n/a | ||
Prep. Method: | All chemicals were manipulated in glass vessels and effector samples were neither degassed nor filtered, to avoid evaporation or nonspecific binding. | ||
Name | BDBM19461 | ||
Synonyms: | α-CA inhibitor, 5 | 5,7-dihydroxy-2-(4-hydroxyphenyl)-3,4-dihydro-2H-1-benzopyran-4-one | CHEMBL32571 | Naringenin | Naringenin (NAR) | naringetol | salipurpol | ||
Type | Estrgen Antagonist | ||
Emp. Form. | C15H12O5 | ||
Mol. Mass. | 272.2528 | ||
SMILES | Oc1ccc(cc1)C1CC(=O)c2c(O)cc(O)cc2O1 | ||
Structure |
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