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TargetDNA-directed RNA polymerase subunit beta
LigandBDBM34599
Substrate/Competitorn/a
Meas. Tech.RNA polymerase dose-response confirmation
IC50 26321.7±1394.25 nM
Citation PubChem, PC RNA polymerase dose-response confirmation PubChem Bioassay(2008)[AID]
More Info.:Get all data from this article,   Solution Info,  Assay Method
 
DNA-directed RNA polymerase subunit beta
Name:DNA-directed RNA polymerase subunit beta
Synonyms:RNA polymerase beta subunit (EC 2.7.7.6)
Type:Enzyme Catalytic Domain
Mol. Mass.:150595.80
Organism:Escherichia coli
Description:A0A0E2LB94
Residue:1342
Sequence:
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQME
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDVKLIEVPVEYIAGKVVAKD
YIDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETLRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGIL
SKDDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDEEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGVVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLK
LGDLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM34599
n/a
NameBDBM34599
Synonyms:1-[5-chloranyl-2-(trifluoromethyl)-1,3-benzodioxol-2-yl]-3-(6-morpholin-4-ylpyrimidin-4-yl)urea | 1-[5-chloro-2-(trifluoromethyl)-1,3-benzodioxol-2-yl]-3-(6-morpholin-4-ylpyrimidin-4-yl)urea | 1-[5-chloro-2-(trifluoromethyl)-1,3-benzodioxol-2-yl]-3-(6-morpholinopyrimidin-4-yl)urea | 1-[5-chloro-2-(trifluoromethyl)-1,3-benzodioxol-2-yl]-3-[6-(4-morpholinyl)-4-pyrimidinyl]urea | MLS000085600 | N-[5-chloro-2-(trifluoromethyl)-1,3-benzodioxol-2-yl]-N'-(6-morpholin-4-ylpyrimidin-4-yl)urea | SMR000020535 | cid_3236557
TypeSmall organic molecule
Emp. Form.C17H15ClF3N5O4
Mol. Mass.445.78
SMILESFC(F)(F)C1(NC(=O)Nc2cc(ncn2)N2CCOCC2)Oc2ccc(Cl)cc2O1
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: