Ki Summary BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetHistone deacetylase
LigandBDBM50234055
Substrate/Competitorn/a
Meas. Tech.ChEMBL_416719 (CHEMBL909985)
IC50 10±n/a nM
Citation Mai, AMassa, SRotili, DSimeoni, SRagno, RBotta, GNebbioso, AMiceli, MAltucci, LBrosch, G Synthesis and biological properties of novel, uracil-containing histone deacetylase inhibitors. J Med Chem49:6046-56 (2006) [PubMed]  Article
More Info.:Get all data from this article,  Assay Method
 
Histone deacetylase
Name:Histone deacetylase
Synonyms:Histone deacetylase HD1B
Type:PROTEIN
Mol. Mass.:50930.01
Organism:Zea mays
Description:ChEMBL_422128
Residue:458
Sequence:
MAASGEGVSLPSPAGGEDAHRRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGL
HRLLELSRPYPASEADIRRFHSDDYVAFLASATGNPGVLDPRAIKRFNVGEDCPVFDGLF
PFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKFH
RRVLYVDIDVHHGDGVEEAFFTTNRVMTVSFHKYGDFFPGTGHITDVGAAEGKHYALNVP
LSDGIDDTTFRGLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRF
LRSYNVPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYTLHIQP
KSVENLNTTKDLENIKNMILENLSKIEHVPSTQFHDRPSDPEAPEEKEEDMDKRPPQRSR
LWSGGAYDSDTEDPDSLKSEGKDVTANFQMKDEPKDDL
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM50234055
n/a
NameBDBM50234055
Synonyms:CHEMBL217494 | N-hydroxy-5-(3,4-dihydro-4-oxo-6-phenyl-2-pyrimidinylthio)pentanamide | N-hydroxy-5-(6-oxo-4-phenyl-1,6-dihydropyrimidin-2-ylthio)pentanamide
TypeSmall organic molecule
Emp. Form.C15H17N3O3S
Mol. Mass.319.379
SMILESONC(=O)CCCCSc1nc(cc(=O)[nH]1)-c1ccccc1
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: