Ki Summary BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetIntegrase
LigandBDBM50088350
Substrate/Competitorn/a
Meas. Tech.ChEMBL_88615 (CHEMBL701719)
IC50 1200±n/a nM
Citation Carlson, HAMasukawa, KMRubins, KBushman, FDJorgensen, WLLins, RDBriggs, JMMcCammon, JA Developing a dynamic pharmacophore model for HIV-1 integrase. J Med Chem43:2100-14 (2000) [PubMed]
More Info.:Get all data from this article,  Assay Method
 
Integrase
Name:Integrase
Synonyms:Human immunodeficiency virus type 1 integrase
Type:PROTEIN
Mol. Mass.:32231.48
Organism:Human immunodeficiency virus 1
Description:ChEMBL_90865
Residue:288
Sequence:
FLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGI
WQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSN
FTSTTVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV
FIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAK
LLWKGEGAVVIQDNSDIKVVPRRKVKIIRDYGKQMAGDDCVASRQDED
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM50088350
n/a
NameBDBM50088350
Synonyms:CHEMBL430786 | Sodium; 1-[N'-(4-dimethylamino-3,6,12-trihydroxy-6,10-dimethyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydro-naphthacene-2-carbonyl)-hydrazino]-cyclopentanecarboxylate
TypeSmall organic molecule
Emp. Form.C29H34N3O8
Mol. Mass.552.5961
SMILESCN(C)[C@H]1[C@@H]2C[C@H]3C(C(=O)C2C(=O)C(C(=O)NNC2(CCCC2)C([O-])=O)C1=O)C(=O)c1c(C)cccc1C3(C)O
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: