Ki Summary BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetRetinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
LigandBDBM50019825
Substrate/Competitorn/a
Meas. Tech.ChEMBL_1361547 (CHEMBL3294871)
Kd 13±n/a nM
Citation Zimmermann, GSchultz-Fademrecht, CKüchler, PMurarka, SIsmail, STriola, GNussbaumer, PWittinghofer, AWaldmann, H Structure guided design and kinetic analysis of highly potent benzimidazole inhibitors targeting the PDEd prenyl binding site. J Med Chem57:5435-48 (2014) [PubMed]  Article
More Info.:Get all data from this article,  Assay Method
 
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Name:Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Synonyms:3',5'-cyclic phosphodiesterase | GMP-PDE delta | PDE6D | PDE6D_HUMAN | PDED | Protein p17 | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Type:PROTEIN
Mol. Mass.:17418.30
Organism:Homo sapiens (Human)
Description:ChEMBL_105761
Residue:150
Sequence:
MSAKDERAREILRGFKLNWMNLRDAETGKILWQGTEDLSVPGVEHEARVPKKILKCKAVS
RELNFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQSLIEAAPESQMMPA
SVLTGNVIIETKFFDDDLLVSTSRVRLFYV
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM50019825
n/a
NameBDBM50019825
Synonyms:CHEMBL3286905
TypeSmall organic molecule
Emp. Form.C39H40N6O2
Mol. Mass.624.7739
SMILESO=C(OCC(C1CCNC1)n1c(nc2ccccc12)-c1ccccc1)C1CCN(CC1)c1nc2ccccc2n1Cc1ccccc1
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: