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Reaction Details
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TargetPeptide deformylase
LigandBDBM92764
Substrate/Competitorn/a
Meas. Tech.Binding Assay
Ki 213±0.0 nM
Citation Totoritis, RDuraiswami, CTaylor, ANKerrigan, JJCampobasso, NSmith, KJWard, PKing, BWMurrayz-Thompson, MJones, ADVan Aller, GSAubart, KMZalacain, MThrall, SHMeek, TDSchwartz, B Understanding the origins of time-dependent inhibition by polypeptide deformylase inhibitors. Biochemistry50:6642-54 (2011) [PubMed]  Article
More Info.:Get all data from this article,  Assay Method
 
Peptide deformylase
Name:Peptide deformylase
Synonyms:DEF_STRR6 | PDF | Polypeptide Deformylase | Polypeptide deformylase (PDF) | def
Type:Enzyme
Mol. Mass.:22684.24
Organism:Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Description:The pdf gene from S. pneumoniae was cloned and protein was expressed and purified from E. coli BL21(DE3).
Residue:203
Sequence:
MSAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPV
MAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQ
DAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHING
IMFYDRINEKDPFAVKDGLLILE
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM92764
n/a
NameBDBM92764
Synonyms:PDF inhibitor, compound 6
TypeSmall molecule
Emp. Form.C28H34ClN9O4S
Mol. Mass.628.145
SMILESCNC(=O)c1cccc(C)c1Nc1nc(nc(n1)N1CCN(CC1)c1ccccc1Cl)N1CSC[C@H]1COCC(=O)NO |r|
Structure
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