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TargetDNA gyrase subunit A
LigandBDBM93041
Substrate/Competitorn/a
Meas. Tech.Enzyme Assay
IC50>2.00e+5±n/a nM
Citation Karkare, SChung, TTCollin, FMitchenall, LAMcKay, ARGreive, SJMeyer, JJLall, NMaxwell, A The naphthoquinone diospyrin is an inhibitor of DNA gyrase with a novel mechanism of action. J Biol Chem288:5149-56 (2013) [PubMed]  Article
More Info.:Get all data from this article,  Assay Method
 
DNA gyrase subunit A
Name:DNA gyrase subunit A
Synonyms:GYRA_MYCTU | Type IIA topoisomerase subunit GyrA | gyrA
Type:Protein
Mol. Mass.:92261.11
Organism:Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Description:P9WG47
Residue:838
Sequence:
MTDTTLPPDDSLDRIEPVDIEQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMF
DSGFRPDRSHAKSARSVAETMGNYHPHGDASIYDSLVRMAQPWSLRYPLVDGQGNFGSPG
NDPPAAMRYTEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGG
IAVGMATNIPPHNLRELADAVFWALENHDADEEETLAAVMGRVKGPDFPTAGLIVGSQGT
ADAYKTGRGSIRMRGVVEVEEDSRGRTSLVITELPYQVNHDNFITSIAEQVRDGKLAGIS
NIEDQSSDRVGLRIVIEIKRDAVAKVVINNLYKHTQLQTSFGANMLAIVDGVPRTLRLDQ
LIRYYVDHQLDVIVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASETVDIARAG
LIELLDIDEIQAQAILDMQLRRLAALERQRIIDDLAKIEAEIADLEDILAKPERQRGIVR
DELAEIVDRHGDDRRTRIIAADGDVSDEDLIAREDVVVTITETGYAKRTKTDLYRSQKRG
GKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLL
AFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELV
GAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREG
TYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSG
GGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNAEESGDDNAVDANGADQTGN
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM93041
n/a
NameBDBM93041
Synonyms:Shinanolone
TypeSmall molecule
Emp. Form.C11H12O3
Mol. Mass.192.2112
SMILESC[C@@H]1CC(=O)c2c(O)cccc2[C@@H]1O
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: