Ki Summary BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetProtein Nef
LigandBDBM288042
Substrate/Competitorn/a
Meas. Tech.Measurement of Antiviral (HIV-1) Activity
Temperature298.15±n/a K
EC50 10.00±n/a nM
Commentsextracted
Citation Miyazaki, SIsoshima, HOshita, KKawashita, SNagahashi, NTerashita, M Substituted spiropyrido[1,2-a]pyrazine derivative and medicinal use thereof as HIV integrase inhibitor US Patent US10087178 Publication Date 10/2/2018
More Info.:Get all data from this article,  Assay Method
 
Protein Nef
Name:Protein Nef
Synonyms:3ORF | F-protein | HIV-1 Nef | NEF_HV1BR | Negative factor | Protein Nef | nef
Type:C-terminal core protein
Mol. Mass.:23340.47
Organism:Human immunodeficiency virus type 1 (isolate BRU/LAI group M subtype B)
Description:P03406
Residue:206
Sequence:
MGGKWSKSSVVGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEA
QEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGY
FPDWQNYTPGPGVRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREV
LEWRFDSRLAFHHVARELHPEYFKNC
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM288042
n/a
NameBDBM288042
Synonyms:US10087178, Example S2 | cis-3-(benzyloxy)-N-(2,4- difluorobenzyl)-9'-hydroxy- 2'-isopropyl-1',8'-dioxo- 1',2',3',8'- tetrahydrospiro[cyclobutane- 1,4'-pyrido[1,2-a]pyrazine]- 7'-carboxamide hydrochloride
TypeSmall organic molecule
Emp. Form.C29H29F2N3O5
Mol. Mass.537.5545
SMILESCC(C)N1C[C@]2(C[C@@H](C2)OCc2ccccc2)n2cc(C(=O)NCc3ccc(F)cc3F)c(=O)c(O)c2C1=O |r,wU:5.8,wD:7.9,(6.67,4.55,;6.67,3.01,;8,2.24,;5.33,2.24,;5.33,.7,;4,-.07,;5.09,-1.15,;4,-2.24,;2.91,-1.15,;4,-3.78,;5.33,-4.55,;6.67,-3.78,;8,-4.55,;9.34,-3.78,;9.34,-2.24,;8,-1.47,;6.67,-2.24,;2.67,.7,;1.33,-.07,;,.7,;-1.33,-.07,;-1.33,-1.61,;-2.67,.7,;-4,-.07,;-5.33,.7,;-5.33,2.24,;-6.67,3.01,;-8,2.24,;-9.34,3.01,;-8,.7,;-6.67,-.07,;-6.67,-1.61,;,2.24,;-1.33,3.01,;1.33,3.01,;1.33,4.55,;2.67,2.24,;4,3.01,;4,4.55,)|
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: