Ki Summary BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetHistone deacetylase 6 [440-798]
LigandBDBM198123
Substrate/Competitorn/a
Meas. Tech.HDAC6 fluorescence anisotropy assay
Temperature298.15±n/a K
Ki 800±100 nM
IC50 1400±200 nM
Commentsextracted
Citation Hai, YUniversity of Pennsylvania,, DW Histone deacetylase 6 structure and molecular basis of catalysis and inhibition Nat Chem Biol12:741-747 (2016) [PubMed]  Article
More Info.:Get all data from this article,  Assay Method
 
Histone deacetylase 6 [440-798]
Name:Histone deacetylase 6 [440-798]
Synonyms:Catalytic domain 2 (zCD2) | zCD2
Type:n/a
Mol. Mass.:39850.25
Organism:Danio rerio
Description:F8W4B7[440-798]
Residue:359
Sequence:
SSPITGLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEELRLLSRCHRIPARLATEEEL
ALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSAQAILTG
QVRNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGT
QHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYM
AAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLI
ILEGGYNLTSISESMSMCTSMLLGDSPPSLDHLTPLKTSATVSINNVLRAHAPFWSSLR
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM198123
n/a
NameBDBM198123
Synonyms:Trifluoroketone
TypeSmall organic molecule
Emp. Form.C3H3F3O
Mol. Mass.112.0505
SMILESCC(=O)C(F)(F)F
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: