Identification and structure-activity relationship study of carvacrol derivatives as Mycobacterium tuberculosis chorismate mutase inhibitors

J Enzyme Inhib Med Chem. 2014 Aug;29(4):547-54. doi: 10.3109/14756366.2013.823958. Epub 2013 Oct 3.

Abstract

In the present study, we identified carvacrol, a major phenolic component of oregano oil as a novel small molecule inhibitor of Mycobacterium tuberculosis (MTB) chorismate mutase (CM) enzyme with IC50 of 1.06 ± 0.4 µM. Virtual screening of the BITS-Pilani in-house database using the crystal structure of the MTB CM bound transition state intermediate (PDB: 2FP2) as framework identified carvacrol as a potential lead. Further various carvacrol derivatives were evaluated in vitro for their ability to inhibit MTB CM enzyme, whole cell MTB and cytotoxicity as steps toward the derivation of structure-activity relationships (SAR) and lead optimization.

Keywords: Carvacrol; Mycobacterium tuberculosis; chorismate mutase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-Bacterial Agents / chemical synthesis
  • Anti-Bacterial Agents / chemistry*
  • Anti-Bacterial Agents / pharmacology*
  • Chorismate Mutase / antagonists & inhibitors*
  • Chorismate Mutase / metabolism
  • Cymenes
  • Dose-Response Relationship, Drug
  • Enzyme Inhibitors / chemical synthesis
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / pharmacology*
  • Microbial Sensitivity Tests
  • Models, Molecular
  • Molecular Structure
  • Monoterpenes / chemical synthesis
  • Monoterpenes / chemistry
  • Monoterpenes / pharmacology*
  • Mycobacterium tuberculosis / cytology
  • Mycobacterium tuberculosis / drug effects
  • Mycobacterium tuberculosis / enzymology*
  • Structure-Activity Relationship

Substances

  • Anti-Bacterial Agents
  • Cymenes
  • Enzyme Inhibitors
  • Monoterpenes
  • carvacrol
  • Chorismate Mutase