BindingDB logo
myBDB logout

BDBM50302064 CHEMBL569946::N-(5-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-11-isobutyl-3,6,9,13-tetraoxo-5-(6-oxooctyl)-1,4,7,10-tetraazacyclotridecan-2-yl)pentyl)acetamide

SMILES: CCC(=O)CCCCC[C@@H]1NC(=O)[C@H](CCCCCNC(C)=O)NC(=O)C[C@H](CC(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC1=O

InChI Key: InChIKey=LEWXBXMXEGUQKN-MKKRQWMVSA-N

Data: 4 IC50

Find this compound or compounds like it in BindingDB or PDB:
   Substructure
Similarity at least:  must be >=0.5
Exact match

Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB

Found 4 hits for monomerid = 50302064   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kcal/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Histone deacetylase 1


(Homo sapiens (Human))
BDBM50302064
PNG
(CHEMBL569946 | N-(5-((2S,5S,8S,11S)-8-((1H-indol-3...)
Show SMILES CCC(=O)CCCCC[C@@H]1NC(=O)[C@H](CCCCCNC(C)=O)NC(=O)C[C@H](CC(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC1=O |r|
Show InChI InChI=1S/C37H56N6O6/c1-5-28(45)14-8-6-9-18-32-36(48)43-33(21-26-23-39-30-16-12-11-15-29(26)30)37(49)40-27(20-24(2)3)22-34(46)41-31(35(47)42-32)17-10-7-13-19-38-25(4)44/h11-12,15-16,23-24,27,31-33,39H,5-10,13-14,17-22H2,1-4H3,(H,38,44)(H,40,49)(H,41,46)(H,42,47)(H,43,48)/t27-,31-,32-,33-/m0/s1
PDB
MMDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt
UniProtKB/TrEMBL

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a 42n/an/an/an/an/an/a



The Scripps Research Institute

Curated by ChEMBL


Assay Description
Inhibition of human recombinant HDAC1 after 30 mins by fluorimetric assay


J Med Chem 52: 7836-46 (2009)


Article DOI: 10.1021/jm900850t
BindingDB Entry DOI: 10.7270/Q2M046DK
More data for this
Ligand-Target Pair
Cereblon/Histone deacetylase 6


(Homo sapiens (Human))
BDBM50302064
PNG
(CHEMBL569946 | N-(5-((2S,5S,8S,11S)-8-((1H-indol-3...)
Show SMILES CCC(=O)CCCCC[C@@H]1NC(=O)[C@H](CCCCCNC(C)=O)NC(=O)C[C@H](CC(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC1=O |r|
Show InChI InChI=1S/C37H56N6O6/c1-5-28(45)14-8-6-9-18-32-36(48)43-33(21-26-23-39-30-16-12-11-15-29(26)30)37(49)40-27(20-24(2)3)22-34(46)41-31(35(47)42-32)17-10-7-13-19-38-25(4)44/h11-12,15-16,23-24,27,31-33,39H,5-10,13-14,17-22H2,1-4H3,(H,38,44)(H,40,49)(H,41,46)(H,42,47)(H,43,48)/t27-,31-,32-,33-/m0/s1
PDB
MMDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt
UniProtKB/TrEMBL

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a>1.00E+4n/an/an/an/an/an/a



The Scripps Research Institute

Curated by ChEMBL


Assay Description
Inhibition of human recombinant HDAC6 after 30 mins by fluorimetric assay


J Med Chem 52: 7836-46 (2009)


Article DOI: 10.1021/jm900850t
BindingDB Entry DOI: 10.7270/Q2M046DK
More data for this
Ligand-Target Pair
Histone deacetylase 8


(Homo sapiens (Human))
BDBM50302064
PNG
(CHEMBL569946 | N-(5-((2S,5S,8S,11S)-8-((1H-indol-3...)
Show SMILES CCC(=O)CCCCC[C@@H]1NC(=O)[C@H](CCCCCNC(C)=O)NC(=O)C[C@H](CC(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC1=O |r|
Show InChI InChI=1S/C37H56N6O6/c1-5-28(45)14-8-6-9-18-32-36(48)43-33(21-26-23-39-30-16-12-11-15-29(26)30)37(49)40-27(20-24(2)3)22-34(46)41-31(35(47)42-32)17-10-7-13-19-38-25(4)44/h11-12,15-16,23-24,27,31-33,39H,5-10,13-14,17-22H2,1-4H3,(H,38,44)(H,40,49)(H,41,46)(H,42,47)(H,43,48)/t27-,31-,32-,33-/m0/s1
PDB
MMDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a 150n/an/an/an/an/an/a



The Scripps Research Institute

Curated by ChEMBL


Assay Description
Inhibition of human recombinant HDAC8 after 30 mins by fluorimetric assay


J Med Chem 52: 7836-46 (2009)


Article DOI: 10.1021/jm900850t
BindingDB Entry DOI: 10.7270/Q2M046DK
More data for this
Ligand-Target Pair
Histone deacetylase 3


(Homo sapiens (Human))
BDBM50302064
PNG
(CHEMBL569946 | N-(5-((2S,5S,8S,11S)-8-((1H-indol-3...)
Show SMILES CCC(=O)CCCCC[C@@H]1NC(=O)[C@H](CCCCCNC(C)=O)NC(=O)C[C@H](CC(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC1=O |r|
Show InChI InChI=1S/C37H56N6O6/c1-5-28(45)14-8-6-9-18-32-36(48)43-33(21-26-23-39-30-16-12-11-15-29(26)30)37(49)40-27(20-24(2)3)22-34(46)41-31(35(47)42-32)17-10-7-13-19-38-25(4)44/h11-12,15-16,23-24,27,31-33,39H,5-10,13-14,17-22H2,1-4H3,(H,38,44)(H,40,49)(H,41,46)(H,42,47)(H,43,48)/t27-,31-,32-,33-/m0/s1
PDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a 54n/an/an/an/an/an/a



The Scripps Research Institute

Curated by ChEMBL


Assay Description
Inhibition of human recombinant HDAC3 after 30 mins by fluorimetric assay


J Med Chem 52: 7836-46 (2009)


Article DOI: 10.1021/jm900850t
BindingDB Entry DOI: 10.7270/Q2M046DK
More data for this
Ligand-Target Pair