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5UGB: CRYSTAL STRUCTURE OF THE EGFR KINASE DOMAIN IN COMPLEX WITH 4-(4-{[2- {[(3S)-1-ACETYLPYRROLIDIN-3-YL]AMINO}-9-(PROPAN-2-YL)-9H-PURIN-6- YL]AMINO}PHENYL)-1-METHYLPIPERAZIN-1-IUM
"Epidermal growth factor receptor" ( 0% identity ) with "BDBM50450890" ( exact match ):

A Quick Jmol Tutorial

To bring up the menu: Right-click on Jmol window

Rotate molecule: Hold LeftMouse and drag

Translate molecule: Hold Ctrl-RightMouse and drag. (May not work on Macbook)

Center the view on a selected atom

  • Menu→Set Picking→Center
  • Left-click on desired central atom
  • Menu→Set Picking→Off

Change from Cartoon rendering of protein to "licorice bond" rendering

  • Menu→Select→Protein→All
  • Menu→Style→Bonds→0.2 Å
  • Menu→Style→Structures→Off

Change from "licorice bond" rendering of ligand to van der Waals rendering

  • Menu→Select→Hetero→Ligand
  • Menu→Style→Atoms→100% van der Waals

Save image of current view

  • Menu→Save→PNG image

To learn more about Jmol, see http://www.jmol.org, http://wiki.jmol.org.