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Compile Data Set for Download or QSAR

Marvin 2D Structure

The following exact ligands are found in BindingDB

Wt: 473.9
BDBM432102

Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB (change energy unit to kcal/mol)

Found 7 hits in this display   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Integrin alpha-V/beta-5


(Homo sapiens (Human))
BDBM432102
PNG
(US10577330, Comparison Compound C11)
Show SMILES Cc1cc(Cl)cc([C@@H](CC(O)=O)NC(=O)CNC(=O)c2cccc(NC3=NCCN3)c2)c1O |r,t:25|
Show InChI InChI=1S/C22H24ClN5O5/c1-12-7-14(23)9-16(20(12)32)17(10-19(30)31)28-18(29)11-26-21(33)13-3-2-4-15(8-13)27-22-24-5-6-25-22/h2-4,7-9,17,32H,5-6,10-11H2,1H3,(H,26,33)(H,28,29)(H,30,31)(H2,24,25,27)/t17-/m1/s1
PDB
MMDB

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UniChem
US Patent
n/an/a 2n/an/an/an/an/an/a



Saint Louis University

US Patent


Assay Description
Recombinant human vitronectin (R& D Systems, 2308-VN) at 0.25 μg/mL in TBS+ buffer (25 mM Tris pH 7.4, 137 mM NaCl, 2.7 mM KCl, 1 mM CaCl2, 1 mM...


US Patent US10577330 (2020)


BindingDB Entry DOI: 10.7270/Q2862JVR
More data for this
Ligand-Target Pair
Integrin alpha-5/beta-6


(Homo sapiens (Human))
BDBM432102
PNG
(US10577330, Comparison Compound C11)
Show SMILES Cc1cc(Cl)cc([C@@H](CC(O)=O)NC(=O)CNC(=O)c2cccc(NC3=NCCN3)c2)c1O |r,t:25|
Show InChI InChI=1S/C22H24ClN5O5/c1-12-7-14(23)9-16(20(12)32)17(10-19(30)31)28-18(29)11-26-21(33)13-3-2-4-15(8-13)27-22-24-5-6-25-22/h2-4,7-9,17,32H,5-6,10-11H2,1H3,(H,26,33)(H,28,29)(H,30,31)(H2,24,25,27)/t17-/m1/s1
PDB

UniProtKB/SwissProt

antibodypedia
antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 4n/an/an/an/an/an/a



Saint Louis University

US Patent


Assay Description
Recombinant human LAP (R&D Systems, 246-LP) diluted to 0.25 g/mL in TBS+ buffer (25 mM Tris pH 7.4, 137 mM NaCl, 2.7 mM KCl, 1 mM CaCl2, 1 mM MgCl2, ...


US Patent US10577330 (2020)


BindingDB Entry DOI: 10.7270/Q2862JVR
More data for this
Ligand-Target Pair
Integrin alpha-V/beta-3


(Homo sapiens (Human))
BDBM432102
PNG
(US10577330, Comparison Compound C11)
Show SMILES Cc1cc(Cl)cc([C@@H](CC(O)=O)NC(=O)CNC(=O)c2cccc(NC3=NCCN3)c2)c1O |r,t:25|
Show InChI InChI=1S/C22H24ClN5O5/c1-12-7-14(23)9-16(20(12)32)17(10-19(30)31)28-18(29)11-26-21(33)13-3-2-4-15(8-13)27-22-24-5-6-25-22/h2-4,7-9,17,32H,5-6,10-11H2,1H3,(H,26,33)(H,28,29)(H,30,31)(H2,24,25,27)/t17-/m1/s1
PDB

UniProtKB/SwissProt

antibodypedia
antibodypedia
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AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 9n/an/an/an/an/an/a



Saint Louis University

US Patent


Assay Description
Recombinant human vitronectin (R& D Systems, 2308-VN) diluted to 1 μg/mL in TBS+ buffer (25 mM Tris pH 7.4, 137 mM NaCl, 2.7 mM KCl, 1 mM CaCl2,...


US Patent US10577330 (2020)


BindingDB Entry DOI: 10.7270/Q2862JVR
More data for this
Ligand-Target Pair
Integrin alpha-V/beta-8


(Homo sapiens (Human))
BDBM432102
PNG
(US10577330, Comparison Compound C11)
Show SMILES Cc1cc(Cl)cc([C@@H](CC(O)=O)NC(=O)CNC(=O)c2cccc(NC3=NCCN3)c2)c1O |r,t:25|
Show InChI InChI=1S/C22H24ClN5O5/c1-12-7-14(23)9-16(20(12)32)17(10-19(30)31)28-18(29)11-26-21(33)13-3-2-4-15(8-13)27-22-24-5-6-25-22/h2-4,7-9,17,32H,5-6,10-11H2,1H3,(H,26,33)(H,28,29)(H,30,31)(H2,24,25,27)/t17-/m1/s1
PDB

UniProtKB/SwissProt

antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 11n/an/an/an/an/an/a



Saint Louis University

US Patent


Assay Description
Recombinant human LAP protein (R&D Systems, Inc, 246-LP) diluted to 0.5 g/mL in TBS+ buffer (25 mM Tris pH 7.4, 137 mM NaCl, 2.7 mM KCl, 1 mM CaCl2, ...


US Patent US10577330 (2020)


BindingDB Entry DOI: 10.7270/Q2862JVR
More data for this
Ligand-Target Pair
Integrin alpha-5/alpha-V


(Homo sapiens (Human))
BDBM432102
PNG
(US10577330, Comparison Compound C11)
Show SMILES Cc1cc(Cl)cc([C@@H](CC(O)=O)NC(=O)CNC(=O)c2cccc(NC3=NCCN3)c2)c1O |r,t:25|
Show InChI InChI=1S/C22H24ClN5O5/c1-12-7-14(23)9-16(20(12)32)17(10-19(30)31)28-18(29)11-26-21(33)13-3-2-4-15(8-13)27-22-24-5-6-25-22/h2-4,7-9,17,32H,5-6,10-11H2,1H3,(H,26,33)(H,28,29)(H,30,31)(H2,24,25,27)/t17-/m1/s1
PDB

UniProtKB/SwissProt

antibodypedia
antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 16n/an/an/an/an/an/a



Saint Louis University

US Patent


Assay Description
Purified human fibronectin (R&D Systems, 1918-FN) diluted to 5 μg/mL in TBS+ buffer (25 mM Tris pH 7.4, 137 mM NaCl, 2.7 mM KCl, 1 mM CaCl2, 1 m...


US Patent US10577330 (2020)


BindingDB Entry DOI: 10.7270/Q2862JVR
More data for this
Ligand-Target Pair
Integrin alpha-5/alpha-8


(Homo sapiens (Human))
BDBM432102
PNG
(US10577330, Comparison Compound C11)
Show SMILES Cc1cc(Cl)cc([C@@H](CC(O)=O)NC(=O)CNC(=O)c2cccc(NC3=NCCN3)c2)c1O |r,t:25|
Show InChI InChI=1S/C22H24ClN5O5/c1-12-7-14(23)9-16(20(12)32)17(10-19(30)31)28-18(29)11-26-21(33)13-3-2-4-15(8-13)27-22-24-5-6-25-22/h2-4,7-9,17,32H,5-6,10-11H2,1H3,(H,26,33)(H,28,29)(H,30,31)(H2,24,25,27)/t17-/m1/s1
PDB

UniProtKB/SwissProt

antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 17n/an/an/an/an/an/a



Saint Louis University

US Patent


Assay Description
Recombinant mouse nephronectin protein (R&D Systems, Inc, 4298-NP) diluted to 1 μg/mL in TBS+ buffer (25 mM Tris pH 7.4, 137 mM NaCl, 2.7 mM KCl...


US Patent US10577330 (2020)


BindingDB Entry DOI: 10.7270/Q2862JVR
More data for this
Ligand-Target Pair
Integrin alpha-5/beta-1 [T112H]


(Homo sapiens (Human))
BDBM432102
PNG
(US10577330, Comparison Compound C11)
Show SMILES Cc1cc(Cl)cc([C@@H](CC(O)=O)NC(=O)CNC(=O)c2cccc(NC3=NCCN3)c2)c1O |r,t:25|
Show InChI InChI=1S/C22H24ClN5O5/c1-12-7-14(23)9-16(20(12)32)17(10-19(30)31)28-18(29)11-26-21(33)13-3-2-4-15(8-13)27-22-24-5-6-25-22/h2-4,7-9,17,32H,5-6,10-11H2,1H3,(H,26,33)(H,28,29)(H,30,31)(H2,24,25,27)/t17-/m1/s1
PDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
antibodypedia
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PC cid
PC sid
UniChem
US Patent
n/an/a 33n/an/an/an/an/an/a



Saint Louis University

US Patent


Assay Description
Purified human fibronectin (R&D Systems, 1918-FN) diluted to 2 μg/mL in TBS+ buffer (25 mM Tris pH 7.4, 137 mM NaCl, 2.7 mM KCl, 1 mM CaCl2, 1 m...


US Patent US10577330 (2020)


BindingDB Entry DOI: 10.7270/Q2862JVR
More data for this
Ligand-Target Pair