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Compile Data Set for Download or QSAR

Marvin 2D Structure

The following exact ligands are found in BindingDB

Wt: 416.3
BDBM171664

Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB (change energy unit to kcal/mol)

Found 4 hits in this display   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Beta-secretase 1


(Homo sapiens (Human))
BDBM171664
PNG
(US9085576, 298 | US9611261, Example 298)
Show SMILES Cc1cc(NC(=O)c2ncc(cn2)C#N)cc(c1F)[C@]1(N=C(N)O[C@@H]2C[C@H]12)C(F)F |r,t:22|
Show InChI InChI=1S/C19H15F3N6O2/c1-8-2-10(27-16(29)15-25-6-9(5-23)7-26-15)3-12(14(8)20)19(17(21)22)11-4-13(11)30-18(24)28-19/h2-3,6-7,11,13,17H,4H2,1H3,(H2,24,28)(H,27,29)/t11-,13+,19-/m0/s1
PDB
MMDB

KEGG

UniProtKB/SwissProt

B.MOAD
antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
UniChem

Similars

US Patent
n/an/a 99n/an/an/an/an/an/a



Amgen Inc.

US Patent


Assay Description
The assay buffer used in this screen is 0.05 M acetate, pH 4.2, 10% DMSO final, 100 uM genapol (which is a nonionic detergent, below its Critical Mic...


US Patent US9611261 (2017)


BindingDB Entry DOI: 10.7270/Q21J9CW2
More data for this
Ligand-Target Pair
Beta-secretase 1


(Homo sapiens (Human))
BDBM171664
PNG
(US9085576, 298 | US9611261, Example 298)
Show SMILES Cc1cc(NC(=O)c2ncc(cn2)C#N)cc(c1F)[C@]1(N=C(N)O[C@@H]2C[C@H]12)C(F)F |r,t:22|
Show InChI InChI=1S/C19H15F3N6O2/c1-8-2-10(27-16(29)15-25-6-9(5-23)7-26-15)3-12(14(8)20)19(17(21)22)11-4-13(11)30-18(24)28-19/h2-3,6-7,11,13,17H,4H2,1H3,(H2,24,28)(H,27,29)/t11-,13+,19-/m0/s1
PDB
MMDB

KEGG

UniProtKB/SwissProt

B.MOAD
antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
UniChem

Similars

US Patent
n/an/a 99n/an/an/an/a4.2n/a



AMGEN INC.

US Patent


Assay Description
The assay buffer used in this screen is 0.05 M acetate, pH 4.2, 10% DMSO final, 100 uM genapol (which is a nonionic detergent, below its Critical Mic...


US Patent US9085576 (2015)


BindingDB Entry DOI: 10.7270/Q2CF9NWF
More data for this
Ligand-Target Pair
Cathepsin D


(Homo sapiens (Human))
BDBM171664
PNG
(US9085576, 298 | US9611261, Example 298)
Show SMILES Cc1cc(NC(=O)c2ncc(cn2)C#N)cc(c1F)[C@]1(N=C(N)O[C@@H]2C[C@H]12)C(F)F |r,t:22|
Show InChI InChI=1S/C19H15F3N6O2/c1-8-2-10(27-16(29)15-25-6-9(5-23)7-26-15)3-12(14(8)20)19(17(21)22)11-4-13(11)30-18(24)28-19/h2-3,6-7,11,13,17H,4H2,1H3,(H2,24,28)(H,27,29)/t11-,13+,19-/m0/s1
PDB
MMDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
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PC cid
PC sid
UniChem

Similars

US Patent
n/an/a>4.00E+5n/an/an/an/an/an/a



Amgen Inc.

US Patent


Assay Description
Recombinant Cat D was expressed in CHO cells. The assay buffer for CathepsinD is 0.05 M citrate pH 3.5, 10% DMSO final, 5 mM CHAPS. The Cat D enzyme ...


US Patent US9611261 (2017)


BindingDB Entry DOI: 10.7270/Q21J9CW2
More data for this
Ligand-Target Pair
Cathepsin D


(Homo sapiens (Human))
BDBM171664
PNG
(US9085576, 298 | US9611261, Example 298)
Show SMILES Cc1cc(NC(=O)c2ncc(cn2)C#N)cc(c1F)[C@]1(N=C(N)O[C@@H]2C[C@H]12)C(F)F |r,t:22|
Show InChI InChI=1S/C19H15F3N6O2/c1-8-2-10(27-16(29)15-25-6-9(5-23)7-26-15)3-12(14(8)20)19(17(21)22)11-4-13(11)30-18(24)28-19/h2-3,6-7,11,13,17H,4H2,1H3,(H2,24,28)(H,27,29)/t11-,13+,19-/m0/s1
PDB
MMDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
UniChem

Similars

US Patent
n/an/a>4.00E+5n/an/an/an/a3.5n/a



AMGEN INC.

US Patent


Assay Description
Recombinant Cat D was expressed in CHO cells. The assay buffer for CathepsinD is 0.05 M citrate pH 3.5, 10% DMSO final, 5 mM CHAPS. The Cat D enzyme ...


US Patent US9085576 (2015)


BindingDB Entry DOI: 10.7270/Q2CF9NWF
More data for this
Ligand-Target Pair