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Compile Data Set for Download or QSAR

Marvin 2D Structure

The following exact ligands are found in BindingDB

Wt: 435.7
BDBM171748

Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB (change energy unit to kcal/mol)

Found 4 hits in this display   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Beta-secretase 1


(Homo sapiens (Human))
BDBM171748
PNG
(US9085576, 374 | US9611261, Example 374)
Show SMILES NC1=N[C@@](C(F)F)([C@H]2C[C@H]2O1)c1cc(NCc2nn(cc2Cl)C(F)F)ccc1F |r,t:1|
Show InChI InChI=1S/C17H15ClF5N5O/c18-10-6-28(15(22)23)27-12(10)5-25-7-1-2-11(19)8(3-7)17(14(20)21)9-4-13(9)29-16(24)26-17/h1-3,6,9,13-15,25H,4-5H2,(H2,24,26)/t9-,13+,17+/m0/s1
PDB
MMDB

KEGG

UniProtKB/SwissProt

B.MOAD
antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
UniChem

Similars

US Patent
n/an/a 95.4n/an/an/an/an/an/a



Amgen Inc.

US Patent


Assay Description
The assay buffer used in this screen is 0.05 M acetate, pH 4.2, 10% DMSO final, 100 uM genapol (which is a nonionic detergent, below its Critical Mic...


US Patent US9611261 (2017)


BindingDB Entry DOI: 10.7270/Q21J9CW2
More data for this
Ligand-Target Pair
Beta-secretase 1


(Homo sapiens (Human))
BDBM171748
PNG
(US9085576, 374 | US9611261, Example 374)
Show SMILES NC1=N[C@@](C(F)F)([C@H]2C[C@H]2O1)c1cc(NCc2nn(cc2Cl)C(F)F)ccc1F |r,t:1|
Show InChI InChI=1S/C17H15ClF5N5O/c18-10-6-28(15(22)23)27-12(10)5-25-7-1-2-11(19)8(3-7)17(14(20)21)9-4-13(9)29-16(24)26-17/h1-3,6,9,13-15,25H,4-5H2,(H2,24,26)/t9-,13+,17+/m0/s1
PDB
MMDB

KEGG

UniProtKB/SwissProt

B.MOAD
antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
UniChem

Similars

US Patent
n/an/a 95.4n/an/an/an/a4.2n/a



AMGEN INC.

US Patent


Assay Description
The assay buffer used in this screen is 0.05 M acetate, pH 4.2, 10% DMSO final, 100 uM genapol (which is a nonionic detergent, below its Critical Mic...


US Patent US9085576 (2015)


BindingDB Entry DOI: 10.7270/Q2CF9NWF
More data for this
Ligand-Target Pair
Cathepsin D


(Homo sapiens (Human))
BDBM171748
PNG
(US9085576, 374 | US9611261, Example 374)
Show SMILES NC1=N[C@@](C(F)F)([C@H]2C[C@H]2O1)c1cc(NCc2nn(cc2Cl)C(F)F)ccc1F |r,t:1|
Show InChI InChI=1S/C17H15ClF5N5O/c18-10-6-28(15(22)23)27-12(10)5-25-7-1-2-11(19)8(3-7)17(14(20)21)9-4-13(9)29-16(24)26-17/h1-3,6,9,13-15,25H,4-5H2,(H2,24,26)/t9-,13+,17+/m0/s1
PDB
MMDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
UniChem

Similars

US Patent
n/an/a 1.16E+5n/an/an/an/an/an/a



Amgen Inc.

US Patent


Assay Description
Recombinant Cat D was expressed in CHO cells. The assay buffer for CathepsinD is 0.05 M citrate pH 3.5, 10% DMSO final, 5 mM CHAPS. The Cat D enzyme ...


US Patent US9611261 (2017)


BindingDB Entry DOI: 10.7270/Q21J9CW2
More data for this
Ligand-Target Pair
Cathepsin D


(Homo sapiens (Human))
BDBM171748
PNG
(US9085576, 374 | US9611261, Example 374)
Show SMILES NC1=N[C@@](C(F)F)([C@H]2C[C@H]2O1)c1cc(NCc2nn(cc2Cl)C(F)F)ccc1F |r,t:1|
Show InChI InChI=1S/C17H15ClF5N5O/c18-10-6-28(15(22)23)27-12(10)5-25-7-1-2-11(19)8(3-7)17(14(20)21)9-4-13(9)29-16(24)26-17/h1-3,6,9,13-15,25H,4-5H2,(H2,24,26)/t9-,13+,17+/m0/s1
PDB
MMDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
DrugBank
antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
UniChem

Similars

US Patent
n/an/a 1.16E+5n/an/an/an/a3.5n/a



AMGEN INC.

US Patent


Assay Description
Recombinant Cat D was expressed in CHO cells. The assay buffer for CathepsinD is 0.05 M citrate pH 3.5, 10% DMSO final, 5 mM CHAPS. The Cat D enzyme ...


US Patent US9085576 (2015)


BindingDB Entry DOI: 10.7270/Q2CF9NWF
More data for this
Ligand-Target Pair