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Compile Data Set for Download or QSAR

Marvin 2D Structure

The following exact ligands are found in BindingDB

Wt: 547.6
BDBM427475

Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB (change energy unit to kcal/mol)

Found 3 hits in this display   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Metallo-beta-lactamase type 2


(Klebsiella pneumoniae)
BDBM427475
PNG
((S)-4-(2-(aminomethyl)-1H-benzo[d]imidazol-4-yl)-N...)
Show SMILES NCc1nc2c(cccc2[nH]1)-c1ccc(c(c1-c1nn[nH]n1)S(N)(=O)=O)S(=O)(=O)NC[C@@H]1CNCCN1 |r|
Show InChI InChI=1S/C20H23N11O4S2/c21-8-16-26-14-3-1-2-13(18(14)27-16)12-4-5-15(37(34,35)25-10-11-9-23-6-7-24-11)19(36(22,32)33)17(12)20-28-30-31-29-20/h1-5,11,23-25H,6-10,21H2,(H2,22,32,33)/b13-12+/t11-/m0/s1
PDB

UniProtKB/SwissProt

GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 0.0990n/an/an/an/an/an/a



Merck Sharp & Dohme Corp.

US Patent




US Patent US10544130 (2020)


BindingDB Entry DOI: 10.7270/Q2C82CQH
More data for this
Ligand-Target Pair
Beta-lactamase


()
BDBM427475
PNG
((S)-4-(2-(aminomethyl)-1H-benzo[d]imidazol-4-yl)-N...)
Show SMILES NCc1nc2c(cccc2[nH]1)-c1ccc(c(c1-c1nn[nH]n1)S(N)(=O)=O)S(=O)(=O)NC[C@@H]1CNCCN1 |r|
Show InChI InChI=1S/C20H23N11O4S2/c21-8-16-26-14-3-1-2-13(18(14)27-16)12-4-5-15(37(34,35)25-10-11-9-23-6-7-24-11)19(36(22,32)33)17(12)20-28-30-31-29-20/h1-5,11,23-25H,6-10,21H2,(H2,22,32,33)/b13-12+/t11-/m0/s1
PDB

UniProtKB/TrEMBL

GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 0.110n/an/an/an/an/an/a



Merck Sharp & Dohme Corp.

US Patent




US Patent US10544130 (2020)


BindingDB Entry DOI: 10.7270/Q2C82CQH
More data for this
Ligand-Target Pair
Metallo-beta-lactamase type 2


(Serratia marcescens)
BDBM427475
PNG
((S)-4-(2-(aminomethyl)-1H-benzo[d]imidazol-4-yl)-N...)
Show SMILES NCc1nc2c(cccc2[nH]1)-c1ccc(c(c1-c1nn[nH]n1)S(N)(=O)=O)S(=O)(=O)NC[C@@H]1CNCCN1 |r|
Show InChI InChI=1S/C20H23N11O4S2/c21-8-16-26-14-3-1-2-13(18(14)27-16)12-4-5-15(37(34,35)25-10-11-9-23-6-7-24-11)19(36(22,32)33)17(12)20-28-30-31-29-20/h1-5,11,23-25H,6-10,21H2,(H2,22,32,33)/b13-12+/t11-/m0/s1
PDB

UniProtKB/SwissProt

GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 1.27n/an/an/an/an/an/a



Merck Sharp & Dohme Corp.

US Patent


Assay Description
The Class B enzyme activities were measured in the presence of the test inhibitor in a fluorescence assay against a commercially available substrate ...


US Patent US10544130 (2020)


BindingDB Entry DOI: 10.7270/Q2C82CQH
More data for this
Ligand-Target Pair