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Compile Data Set for Download or QSAR

Marvin 2D Structure

The following exact ligands are found in BindingDB

Wt: 489.5
BDBM361125

Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB (change energy unit to kcal/mol)

Found 6 hits in this display   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Metallo-beta-lactamase type 2


(Klebsiella pneumoniae)
BDBM361125
PNG
((R)-N1-(pyrrolidin-3- yl)-4-(1H-pyrrolo[3,2- b]pyr...)
Show SMILES NS(=O)(=O)c1c(ccc(-c2cnc3cc[nH]c3c2)c1-c1nn[nH]n1)S(=O)(=O)N[C@@H]1CCNC1 |r|
Show InChI InChI=1S/C18H17N9O4S2/c19-32(28,29)17-15(33(30,31)25-11-3-5-20-9-11)2-1-12(16(17)18-23-26-27-24-18)10-7-14-13(22-8-10)4-6-21-14/h1-2,4,6-8,11,20,25H,3,5,9H2,(H2,19,28,29)/b12-10-/t11-/m1/s1
PDB

UniProtKB/SwissProt

GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 0.0450n/an/an/an/an/an/a



Merck Sharp & Dohme Corp.

US Patent




US Patent US10544130 (2020)


BindingDB Entry DOI: 10.7270/Q2C82CQH
More data for this
Ligand-Target Pair
Metallo-beta-lactamase type 2


(Klebsiella pneumoniae)
BDBM361125
PNG
((R)-N1-(pyrrolidin-3- yl)-4-(1H-pyrrolo[3,2- b]pyr...)
Show SMILES NS(=O)(=O)c1c(ccc(-c2cnc3cc[nH]c3c2)c1-c1nn[nH]n1)S(=O)(=O)N[C@@H]1CCNC1 |r|
Show InChI InChI=1S/C18H17N9O4S2/c19-32(28,29)17-15(33(30,31)25-11-3-5-20-9-11)2-1-12(16(17)18-23-26-27-24-18)10-7-14-13(22-8-10)4-6-21-14/h1-2,4,6-8,11,20,25H,3,5,9H2,(H2,19,28,29)/b12-10-/t11-/m1/s1
PDB

UniProtKB/SwissProt

GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 0.0450n/an/an/an/an/an/a



Merck Sharp & Dohme Corp.

US Patent


Assay Description
The Class B enzyme activities were measured in the presence of the test inhibitor in a fluorescence assay against a commercially available substrate ...


US Patent US10221163 (2019)


BindingDB Entry DOI: 10.7270/Q2RX9FB1
More data for this
Ligand-Target Pair
Beta-lactamase


()
BDBM361125
PNG
((R)-N1-(pyrrolidin-3- yl)-4-(1H-pyrrolo[3,2- b]pyr...)
Show SMILES NS(=O)(=O)c1c(ccc(-c2cnc3cc[nH]c3c2)c1-c1nn[nH]n1)S(=O)(=O)N[C@@H]1CCNC1 |r|
Show InChI InChI=1S/C18H17N9O4S2/c19-32(28,29)17-15(33(30,31)25-11-3-5-20-9-11)2-1-12(16(17)18-23-26-27-24-18)10-7-14-13(22-8-10)4-6-21-14/h1-2,4,6-8,11,20,25H,3,5,9H2,(H2,19,28,29)/b12-10-/t11-/m1/s1
PDB

UniProtKB/TrEMBL

GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 0.133n/an/an/an/an/an/a



Merck Sharp & Dohme Corp.

US Patent




US Patent US10544130 (2020)


BindingDB Entry DOI: 10.7270/Q2C82CQH
More data for this
Ligand-Target Pair
VIM-1 metallo-beta-lactamase


(Klebsiella pneumoniae)
BDBM361125
PNG
((R)-N1-(pyrrolidin-3- yl)-4-(1H-pyrrolo[3,2- b]pyr...)
Show SMILES NS(=O)(=O)c1c(ccc(-c2cnc3cc[nH]c3c2)c1-c1nn[nH]n1)S(=O)(=O)N[C@@H]1CCNC1 |r|
Show InChI InChI=1S/C18H17N9O4S2/c19-32(28,29)17-15(33(30,31)25-11-3-5-20-9-11)2-1-12(16(17)18-23-26-27-24-18)10-7-14-13(22-8-10)4-6-21-14/h1-2,4,6-8,11,20,25H,3,5,9H2,(H2,19,28,29)/b12-10-/t11-/m1/s1
PDB

UniProtKB/TrEMBL

GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 0.133n/an/an/an/an/an/a



Merck Sharp & Dohme Corp.

US Patent


Assay Description
The Class B enzyme activities were measured in the presence of the test inhibitor in a fluorescence assay against a commercially available substrate ...


US Patent US10221163 (2019)


BindingDB Entry DOI: 10.7270/Q2RX9FB1
More data for this
Ligand-Target Pair
Metallo-beta-lactamase type 2


(Serratia marcescens)
BDBM361125
PNG
((R)-N1-(pyrrolidin-3- yl)-4-(1H-pyrrolo[3,2- b]pyr...)
Show SMILES NS(=O)(=O)c1c(ccc(-c2cnc3cc[nH]c3c2)c1-c1nn[nH]n1)S(=O)(=O)N[C@@H]1CCNC1 |r|
Show InChI InChI=1S/C18H17N9O4S2/c19-32(28,29)17-15(33(30,31)25-11-3-5-20-9-11)2-1-12(16(17)18-23-26-27-24-18)10-7-14-13(22-8-10)4-6-21-14/h1-2,4,6-8,11,20,25H,3,5,9H2,(H2,19,28,29)/b12-10-/t11-/m1/s1
PDB

UniProtKB/SwissProt

GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 1.13n/an/an/an/an/an/a



Merck Sharp & Dohme Corp.

US Patent


Assay Description
The Class B enzyme activities were measured in the presence of the test inhibitor in a fluorescence assay against a commercially available substrate ...


US Patent US10221163 (2019)


BindingDB Entry DOI: 10.7270/Q2RX9FB1
More data for this
Ligand-Target Pair
Metallo-beta-lactamase type 2


(Serratia marcescens)
BDBM361125
PNG
((R)-N1-(pyrrolidin-3- yl)-4-(1H-pyrrolo[3,2- b]pyr...)
Show SMILES NS(=O)(=O)c1c(ccc(-c2cnc3cc[nH]c3c2)c1-c1nn[nH]n1)S(=O)(=O)N[C@@H]1CCNC1 |r|
Show InChI InChI=1S/C18H17N9O4S2/c19-32(28,29)17-15(33(30,31)25-11-3-5-20-9-11)2-1-12(16(17)18-23-26-27-24-18)10-7-14-13(22-8-10)4-6-21-14/h1-2,4,6-8,11,20,25H,3,5,9H2,(H2,19,28,29)/b12-10-/t11-/m1/s1
PDB

UniProtKB/SwissProt

GoogleScholar
AffyNet 
PC cid
PC sid
UniChem
US Patent
n/an/a 1.13n/an/an/an/an/an/a



Merck Sharp & Dohme Corp.

US Patent


Assay Description
The Class B enzyme activities were measured in the presence of the test inhibitor in a fluorescence assay against a commercially available substrate ...


US Patent US10544130 (2020)


BindingDB Entry DOI: 10.7270/Q2C82CQH
More data for this
Ligand-Target Pair