Reaction Details | |||
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Cell Reactant: | RNA(23-mer) | ||
Syringe Reactant: | BDBM19 | ||
Meas. Tech.: | ITC | ||
Entry Date: | 12/19/00 | ||
ΔG°: | -6.40± (kcal/mole) | ||
pH: | 7±n/a | ||
Log10Kb: | 4.69± 0.0864 | ||
Temperature: | 298.15±n/a (K) | ||
ΔH° : | -17.3± (kcal/mole) | ||
ΔHobs : | -17.3± (kcal/mole) | ||
Ionic Strength: | n/a | ||
n/a | |||
Protons Released: | n/a | ||
ΔCp : | n/a | ||
Stoich. Param.: | n/a | ||
ΔS° : | -0.0200± (kcal/mole-K) | ||
Comments: | low affinity site | ||
Citation | Cowan, JA; Ohyama, T; Wang, D; Natarajan, K Recognition of a cognate RNA aptamer by neomycin B: quantitative evaluation of hydrogen bonding and electrostatic interactions. Nucleic Acids Res28:2935-42 (2000) [PubMed] Article | ||
More Info.: | Get all data from this article , ITC RUN data , Solution Info | ||
RNA(23-mer) | |||
Source: | in vitro transcription using T7 RNA polymerase | ||
Purity: | n/a | ||
Prep. Method: | purified using PAGE and electroeluted from the gel | ||
Name: | RNA(23-mer) | ||
Synonyms: | RNA 23mer | ||
Type: | RNA | ||
Mol. Mass.: | 1388.55 | ||
Organism: | n/a | ||
Description: | n/a | ||
Residue: | 19 | ||
Sequence: |
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BDBM19 | |||
Source: | Sigma (St. Louis, MO) | ||
Purity: | n/a | ||
Prep. Method: | n/a | ||
Name | BDBM19 | ||
Synonyms: | (2S,3S,4R,5R,6R)-5-amino-2-(aminomethyl)-6-{[(2R,3S,4R,5S)-5-{[(1R,2R,3S,5R,6S)-3,5-diamino-2-{[(2R,3R,4R,5S,6R)-3-amino-6-(aminomethyl)-4,5-dihydroxyoxan-2-yl]oxy}-6-hydroxycyclohexyl]oxy}-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl]oxy}oxane-3,4-diol | KDR Kinase Inhibitor, 3 | Neomycin | Neomycin B | ||
Type | Small organic molecule | ||
Emp. Form. | C23H46N6O13 | ||
Mol. Mass. | 614.6437 | ||
SMILES | NC[C@@H]1O[C@H](O[C@@H]2[C@@H](CO)O[C@@H](O[C@@H]3[C@@H](O)[C@H](N)C[C@H](N)[C@H]3O[C@H]3O[C@H](CN)[C@@H](O)[C@H](O)[C@H]3N)[C@@H]2O)[C@H](N)[C@@H](O)[C@@H]1O |r| | ||
Structure |
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