BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetDNA-directed RNA polymerase subunit beta
LigandBDBM41196
Substrate/Competitorn/a
Meas. Tech.RNA polymerase dose-response confirmation
IC50>50000±0 nM
Citation PubChem, PC RNA polymerase dose-response confirmation PubChem Bioassay(2008)[AID]
More Info.:Get all data from this article,   Solution Info,  Assay Method
 
DNA-directed RNA polymerase subunit beta
Name:DNA-directed RNA polymerase subunit beta
Synonyms:RNA polymerase beta subunit (EC 2.7.7.6)
Type:Enzyme Catalytic Domain
Mol. Mass.:150595.80
Organism:Escherichia coli
Description:A0A0E2LB94
Residue:1342
Sequence:
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQME
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDVKLIEVPVEYIAGKVVAKD
YIDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETLRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGIL
SKDDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDEEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGVVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLK
LGDLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM41196
n/a
NameBDBM41196
Synonyms:2-[[2-(4-butoxyanilino)-2-keto-ethyl]thio]acetic acid ethyl ester | 2-[[2-(4-butoxyanilino)-2-oxoethyl]thio]acetic acid ethyl ester | MLS000077306 | SMR000010805 | [(4-Butoxy-phenylcarbamoyl)-methylsulfanyl]-acetic acid ethyl ester | cid_650071 | ethyl 2-[2-(4-butoxyanilino)-2-oxoethyl]sulfanylacetate | ethyl 2-[2-[(4-butoxyphenyl)amino]-2-oxidanylidene-ethyl]sulfanylethanoate
TypeSmall organic molecule
Emp. Form.C16H23NO4S
Mol. Mass.325.423
SMILESCCCCOc1ccc(NC(=O)CSCC(=O)OCC)cc1
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: