BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetPolyadenylate-binding protein 1
LigandBDBM61383
Substrate/Competitorn/a
Meas. Tech.uHTS fluorescence polarization assay for the identification of translation initiation inhibitors (PABP)
IC50 2760±n/a nM
Citation PubChem, PC uHTS fluorescence polarization assay for the identification of translation initiation inhibitors (PABP) PubChem Bioassay(2009)[AID]
More Info.:Get all data from this article,   Solution Info,  Assay Method
 
Polyadenylate-binding protein 1
Name:Polyadenylate-binding protein 1
Synonyms:PAB1 | PABP | PABP1 | PABP1_HUMAN | PABPC1 | PABPC2 | poly(A) binding protein, cytoplasmic 1 | polyadenylate-binding protein 1
Type:Enzyme Catalytic Domain
Mol. Mass.:70694.26
Organism:Homo sapiens (Human)
Description:gi_46367787
Residue:636
Sequence:
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQ
RVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM61383
n/a
NameBDBM61383
Synonyms:1-methyl-3-(phenylthio)-2-indolecarboxylic acid methyl ester | 1-methyl-3-(phenylthio)indole-2-carboxylic acid methyl ester | MLS001199068 | SMR000563163 | cid_20888286 | methyl 1-methyl-3-(phenylthio)-1H-indole-2-carboxylate | methyl 1-methyl-3-phenylsulfanyl-indole-2-carboxylate | methyl 1-methyl-3-phenylsulfanylindole-2-carboxylate
TypeSmall organic molecule
Emp. Form.C17H15NO2S
Mol. Mass.297.371
SMILESCOC(=O)c1c(Sc2ccccc2)c2ccccc2n1C
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: