Ki Summary BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetElongin-B/Elongin-C [17-112]/von Hippel-Lindau disease tumor suppressor [55-213]
LigandBDBM536244
Substrate/Competitorn/a
Meas. Tech.Surface Plasmon Resonance Assay
Kd 12100±n/a nM
Citation Blaquiere, NDragovich, PGazzard, LJPillow, TStaben, STWei, BXin, J (4-hydroxypyrrolidin-2-yl)-heterocyclic compounds and methods of use thereof US Patent US11242344 Publication Date 2/8/2022
More Info.:Get all data from this article,  Assay Method
 
Elongin-B/Elongin-C [17-112]/von Hippel-Lindau disease tumor suppressor [55-213]
Name:Elongin-B/Elongin-C [17-112]/von Hippel-Lindau disease tumor suppressor [55-213]
Synonyms:VHL Elongin B/C complex
Type:Protein
Mol. Mass.:n/a
Description:n/a
Components:This complex has 3 components.
Component 1
Name:von Hippel-Lindau disease tumor suppressor [55-213]
Synonyms:VHL | VHL (aa 55-213) | VHL_HUMAN
Type:Protein
Mol. Mass.:18405.28
Organism:Homo sapiens (Human)
Description:P40337[55-213]
Residue:159
Sequence:
EAGRPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRG
HLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPEN
YRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
Component 2
Name:Elongin-B
Synonyms:ELOB | ELOB_HUMAN | Elongin 18 kDa subunit | Elongin-B | RNA polymerase II transcription factor SIII subunit B | SIII p18 | TCEB2 | Transcription elongation factor B polypeptide 2
Type:PROTEIN
Mol. Mass.:13127.13
Organism:Homo sapiens (Human)
Description:ChEMBL_108414
Residue:118
Sequence:
MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC
GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
Component 3
Name:Elongin-C [17-112]
Synonyms:ELOC | ELOC_HUMAN | TCEB1 | Transcription elongation factor B polypeptide 1 (aa 17-112)
Type:PROTEIN
Mol. Mass.:10829.81
Organism:Homo sapiens (Human)
Description:n/a
Residue:96
Sequence:
MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMY
FTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM536244
n/a
NameBDBM536244
Synonyms:(5S)-2-((4R)-4-hydroxy-1-((methylsulfonyl)-L-prolyl) pyrrolidin-2-yl)-5-methyl-5-(4-(4-methylthiazol-5-yl) phenyl)-1,5-dihydro-4H-imidazol-4-one (2 Single Stereoisomers) | US11242344, Example 112.1 | US11242344, Example 112.2
TypeSmall organic molecule
Emp. Form.C24H29N5O5S2
Mol. Mass.531.648
SMILESCc1ncsc1-c1ccc(cc1)[C@]1(C)NC(=NC1=O)C1C[C@@H](O)CN1C(=O)[C@@H]1CCCN1S(C)(=O)=O |r,c:17|
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: