Ki Summary BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetDNA helicase [35-727]
LigandBDBM50370548
Substrate/Competitorn/a
Meas. Tech.DNA Helicase Assay
pH8±0
Temperature310.15±0 K
IC50 3.5e+3±n/a nM
Citation Tarique, MTabassum, FAhmad, MTuteja, R Plasmodium falciparum UvrD activities are downregulated by DNA-interacting compounds and its dsRNA inhibits malaria parasite growth. BMC Biochem15:9 (2014) [PubMed]  Article
More Info.:Get all data from this article,  Assay Method
 
DNA helicase [35-727]
Name:DNA helicase [35-727]
Synonyms:UvrD helicase (PfUDN)
Type:Enzyme
Mol. Mass.:81959.48
Organism:Plasmodium falciparum
Description:N-terminal fragment of P. falciparum UvrD helicase (35-727 aa)
Residue:693
Sequence:
NFSEEQQRIIEIPMNVNLCIIACPGSGKTSTLTARIIKSIIEEKQSIVCITFTNYAASDL
KDKIMKKINCLIDICVDNKINQKLFNNKNNKINFSLKNKCTLNNKMNKSIFKVLNTVMFI
GTIHSFCRYILYKYKGTFKILTDFINTNIIKLAFNNFYSSMMSKTKGTQPGFSTILERKS
NKASTQNCDPDKINTHNNDDNINNKNDYINNKNKNDYNNINNYDNINNYDNINNDDNINN
DDNINNDDNINNDDNINNDDDINNCGNCNQPKGIPSQLAYFINCMKNAEIKEDEEKEFYE
EEHDIQNDILNNDDNNNDEDDDDDDEFYNYLYNFKHSYEQTNDYFANEQVQSVLKKKNII
FLKKKIKLMKYIELYNIKIEINDVEKMFYEEYKKIFKKAKNIYYDFDDLLIETYRLMKDN
ADIRNKILEEWNYVFCDEFQDTNTTQFNILQFFVNHNVPSTLDQSIYTSGNLENKDIKDN
HNISMSTYKSKQYSHSVQNFFNEHKVDQQLCDQIYFDKHCNNILMQNKNQQATHKHSEEE
EEQEEEKKKNKKTKKTNTFINQQKIKTQTVLSYKQDEMSSSASSTYSYVKIEKEKKKYAL
NKIDDTYYNKKNIYSNNDEILDIENEQTFFNNNCNEKNKTKKKCNLKDRSLTVIGDDDQS
IYSFRGAHINVFYKFLKDCNCLLFKLNNNFRST
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM50370548
n/a
NameBDBM50370548
Synonyms:NOGALAMYCIN
TypeSmall organic molecule
Emp. Form.C39H49NO16
Mol. Mass.787.8035
SMILESCO[C@H]1[C@H](C)O[C@@H](O[C@H]2C[C@](C)(O)[C@H](C(=O)OC)c3cc4C(=O)c5c6O[C@@H]7O[C@@](C)([C@H](O)[C@H]([C@@H]7O)N(C)C)c6cc(O)c5C(=O)c4c(O)c23)[C@H](OC)[C@]1(C)OC |r|
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: