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BDBM50302076 6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-11-isobutyl-2-methyl-3,6,9,13-tetraoxo-1,4,7,10-tetraazacyclotridecan-5-yl)hexanoic acid::CHEMBL570490

SMILES: CC(C)C[C@H]1CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCCCC(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1

InChI Key: InChIKey=BLVLSEPOIOLKDB-BTDFZRAWSA-N

Data: 8 IC50

Find this compound or compounds like it in BindingDB or PDB:
   Substructure
Similarity at least:  must be >=0.5
Exact match

Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB

Found 8 hits for monomerid = 50302076   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kcal/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Histone deacetylase 3/Nuclear receptor corepressor 2 (HDAC3/NCoR2)


(Homo sapiens (Human))
BDBM50302076
PNG
(6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-11-iso...)
Show SMILES CC(C)C[C@H]1CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCCCC(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1 |r|
Show InChI InChI=1S/C29H41N5O6/c1-17(2)13-20-15-25(35)31-18(3)27(38)33-23(11-5-4-6-12-26(36)37)28(39)34-24(29(40)32-20)14-19-16-30-22-10-8-7-9-21(19)22/h7-10,16-18,20,23-24,30H,4-6,11-15H2,1-3H3,(H,31,35)(H,32,40)(H,33,38)(H,34,39)(H,36,37)/t18-,20-,23-,24-/m0/s1
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n/an/a 610n/an/an/an/an/an/a



TBA

Curated by ChEMBL


Assay Description
Inhibition of HDAC3-NCoR2 in human HeLa cells nuclear extract using Fluor-de-Lys as substrate after 30 mins by spectrophotometry


ACS Med Chem Lett 2: 703-707 (2011)


Article DOI: 10.1021/ml200136e
BindingDB Entry DOI: 10.7270/Q2GQ6ZRX
More data for this
Ligand-Target Pair
Histone deacetylase 1


(Homo sapiens (Human))
BDBM50302076
PNG
(6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-11-iso...)
Show SMILES CC(C)C[C@H]1CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCCCC(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1 |r|
Show InChI InChI=1S/C29H41N5O6/c1-17(2)13-20-15-25(35)31-18(3)27(38)33-23(11-5-4-6-12-26(36)37)28(39)34-24(29(40)32-20)14-19-16-30-22-10-8-7-9-21(19)22/h7-10,16-18,20,23-24,30H,4-6,11-15H2,1-3H3,(H,31,35)(H,32,40)(H,33,38)(H,34,39)(H,36,37)/t18-,20-,23-,24-/m0/s1
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n/an/a 116n/an/an/an/an/an/a



The Scripps Research Institute

Curated by ChEMBL


Assay Description
Inhibition of human recombinant HDAC1 after 30 mins by fluorimetric assay


J Med Chem 52: 7836-46 (2009)


Article DOI: 10.1021/jm900850t
BindingDB Entry DOI: 10.7270/Q2M046DK
More data for this
Ligand-Target Pair
Histone deacetylase 3


(Homo sapiens (Human))
BDBM50302076
PNG
(6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-11-iso...)
Show SMILES CC(C)C[C@H]1CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCCCC(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1 |r|
Show InChI InChI=1S/C29H41N5O6/c1-17(2)13-20-15-25(35)31-18(3)27(38)33-23(11-5-4-6-12-26(36)37)28(39)34-24(29(40)32-20)14-19-16-30-22-10-8-7-9-21(19)22/h7-10,16-18,20,23-24,30H,4-6,11-15H2,1-3H3,(H,31,35)(H,32,40)(H,33,38)(H,34,39)(H,36,37)/t18-,20-,23-,24-/m0/s1
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n/an/a 608n/an/an/an/an/an/a



The Scripps Research Institute

Curated by ChEMBL


Assay Description
Inhibition of human recombinant HDAC3 after 30 mins by fluorimetric assay


J Med Chem 52: 7836-46 (2009)


Article DOI: 10.1021/jm900850t
BindingDB Entry DOI: 10.7270/Q2M046DK
More data for this
Ligand-Target Pair
Cereblon/Histone deacetylase 6


(Homo sapiens (Human))
BDBM50302076
PNG
(6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-11-iso...)
Show SMILES CC(C)C[C@H]1CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCCCC(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1 |r|
Show InChI InChI=1S/C29H41N5O6/c1-17(2)13-20-15-25(35)31-18(3)27(38)33-23(11-5-4-6-12-26(36)37)28(39)34-24(29(40)32-20)14-19-16-30-22-10-8-7-9-21(19)22/h7-10,16-18,20,23-24,30H,4-6,11-15H2,1-3H3,(H,31,35)(H,32,40)(H,33,38)(H,34,39)(H,36,37)/t18-,20-,23-,24-/m0/s1
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n/an/a 2.30E+3n/an/an/an/an/an/a



TBA

Curated by ChEMBL


Assay Description
Inhibition of HDAC6 in human HeLa cells nuclear extract using Fluor-de-Lys as substrate after 30 mins by spectrophotometry


ACS Med Chem Lett 2: 703-707 (2011)


Article DOI: 10.1021/ml200136e
BindingDB Entry DOI: 10.7270/Q2GQ6ZRX
More data for this
Ligand-Target Pair
Cereblon/Histone deacetylase 6


(Homo sapiens (Human))
BDBM50302076
PNG
(6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-11-iso...)
Show SMILES CC(C)C[C@H]1CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCCCC(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1 |r|
Show InChI InChI=1S/C29H41N5O6/c1-17(2)13-20-15-25(35)31-18(3)27(38)33-23(11-5-4-6-12-26(36)37)28(39)34-24(29(40)32-20)14-19-16-30-22-10-8-7-9-21(19)22/h7-10,16-18,20,23-24,30H,4-6,11-15H2,1-3H3,(H,31,35)(H,32,40)(H,33,38)(H,34,39)(H,36,37)/t18-,20-,23-,24-/m0/s1
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n/an/a 2.31E+3n/an/an/an/an/an/a



The Scripps Research Institute

Curated by ChEMBL


Assay Description
Inhibition of human recombinant HDAC6 after 30 mins by fluorimetric assay


J Med Chem 52: 7836-46 (2009)


Article DOI: 10.1021/jm900850t
BindingDB Entry DOI: 10.7270/Q2M046DK
More data for this
Ligand-Target Pair
Histone deacetylase 8


(Homo sapiens (Human))
BDBM50302076
PNG
(6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-11-iso...)
Show SMILES CC(C)C[C@H]1CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCCCC(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1 |r|
Show InChI InChI=1S/C29H41N5O6/c1-17(2)13-20-15-25(35)31-18(3)27(38)33-23(11-5-4-6-12-26(36)37)28(39)34-24(29(40)32-20)14-19-16-30-22-10-8-7-9-21(19)22/h7-10,16-18,20,23-24,30H,4-6,11-15H2,1-3H3,(H,31,35)(H,32,40)(H,33,38)(H,34,39)(H,36,37)/t18-,20-,23-,24-/m0/s1
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n/an/a 2.30E+3n/an/an/an/an/an/a



TBA

Curated by ChEMBL


Assay Description
Inhibition of HDAC8 in human HeLa cells nuclear extract using Arg-His-Lys(Ac)-Lys(Ac)-AMC as substrate after 30 mins by spectrophotometry


ACS Med Chem Lett 2: 703-707 (2011)


Article DOI: 10.1021/ml200136e
BindingDB Entry DOI: 10.7270/Q2GQ6ZRX
More data for this
Ligand-Target Pair
Histone deacetylase 1


(Homo sapiens (Human))
BDBM50302076
PNG
(6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-11-iso...)
Show SMILES CC(C)C[C@H]1CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCCCC(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1 |r|
Show InChI InChI=1S/C29H41N5O6/c1-17(2)13-20-15-25(35)31-18(3)27(38)33-23(11-5-4-6-12-26(36)37)28(39)34-24(29(40)32-20)14-19-16-30-22-10-8-7-9-21(19)22/h7-10,16-18,20,23-24,30H,4-6,11-15H2,1-3H3,(H,31,35)(H,32,40)(H,33,38)(H,34,39)(H,36,37)/t18-,20-,23-,24-/m0/s1
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n/an/a 120n/an/an/an/an/an/a



TBA

Curated by ChEMBL


Assay Description
Inhibition of HDAC1 in human HeLa cells nuclear extract using Fluor-de-Lys as substrate after 30 mins by spectrophotometry


ACS Med Chem Lett 2: 703-707 (2011)


Article DOI: 10.1021/ml200136e
BindingDB Entry DOI: 10.7270/Q2GQ6ZRX
More data for this
Ligand-Target Pair
Histone deacetylase 8


(Homo sapiens (Human))
BDBM50302076
PNG
(6-((2S,5S,8S,11S)-8-((1H-indol-3-yl)methyl)-11-iso...)
Show SMILES CC(C)C[C@H]1CC(=O)N[C@@H](C)C(=O)N[C@@H](CCCCCC(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N1 |r|
Show InChI InChI=1S/C29H41N5O6/c1-17(2)13-20-15-25(35)31-18(3)27(38)33-23(11-5-4-6-12-26(36)37)28(39)34-24(29(40)32-20)14-19-16-30-22-10-8-7-9-21(19)22/h7-10,16-18,20,23-24,30H,4-6,11-15H2,1-3H3,(H,31,35)(H,32,40)(H,33,38)(H,34,39)(H,36,37)/t18-,20-,23-,24-/m0/s1
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n/an/a 2.30E+3n/an/an/an/an/an/a



The Scripps Research Institute

Curated by ChEMBL


Assay Description
Inhibition of human recombinant HDAC8 after 30 mins by fluorimetric assay


J Med Chem 52: 7836-46 (2009)


Article DOI: 10.1021/jm900850t
BindingDB Entry DOI: 10.7270/Q2M046DK
More data for this
Ligand-Target Pair