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Compile Data Set for Download or QSAR

Marvin 2D Structure

The following exact ligands are found in BindingDB

Wt: 199.3
BDBM23434
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Wt: 200.3
BDBM50180948
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Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB (change energy unit to kcal/mol)

Found 11 hits in this display   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
G-protein coupled receptor 84


(Homo sapiens (Human))
BDBM50180948
PNG
(CHEBI:30805 | DODECANOATE | Dodecanoic Acid | Dode...)
Show SMILES CCCCCCCCCCCC(O)=O
Show InChI InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)
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MCE
KEGG
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Article
PubMed
2.17E+3n/an/an/an/an/an/an/an/a



University of Bonn

Curated by ChEMBL


Assay Description
Displacement of [3H]PSB-1584 from recombinant human GPR84 expressed in CHO cell membranes co-expressing beta-arrestin2 measured after 6 hrs by scinti...


J Med Chem 63: 2391-2410 (2020)


Article DOI: 10.1021/acs.jmedchem.9b01339
BindingDB Entry DOI: 10.7270/Q2FJ2M3Q
More data for this
Ligand-Target Pair
Peroxisome proliferator-activated receptor delta


(Homo sapiens (Human))
BDBM50180948
PNG
(CHEBI:30805 | DODECANOATE | Dodecanoic Acid | Dode...)
Show SMILES CCCCCCCCCCCC(O)=O
Show InChI InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)
PDB

UniProtKB/SwissProt

antibodypedia
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MCE
KEGG
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Article
n/an/a 3.00E+4n/an/an/an/an/an/a


TBA

Assay Description
Displacement of [3H]GW2433 from Homo sapiens (human) PPARdelta receptor by scintillation proximity assay


Citation and Details

Article DOI: 10.1007/s00044-012-0285-6
BindingDB Entry DOI: 10.7270/Q2MG7SDK
More data for this
Ligand-Target Pair
Peroxisome proliferator-activated receptor alpha


(Homo sapiens (Human))
BDBM50180948
PNG
(CHEBI:30805 | DODECANOATE | Dodecanoic Acid | Dode...)
Show SMILES CCCCCCCCCCCC(O)=O
Show InChI InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)
PDB

UniProtKB/SwissProt

antibodypedia
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KEGG
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UniChem

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Article
n/an/a 3.00E+4n/an/an/an/an/an/a


TBA

Assay Description
Displacement of [3H]GW2331 from Homo sapiens (human) PPARalpha receptor by scintillation proximity assay


Citation and Details

Article DOI: 10.1007/s00044-012-0285-6
BindingDB Entry DOI: 10.7270/Q2MG7SDK
More data for this
Ligand-Target Pair
Peroxisome proliferator-activated receptor gamma


(Homo sapiens (Human))
BDBM50180948
PNG
(CHEBI:30805 | DODECANOATE | Dodecanoic Acid | Dode...)
Show SMILES CCCCCCCCCCCC(O)=O
Show InChI InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)
PDB
MMDB

NCI pathway
Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
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KEGG
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Article
n/an/a 3.00E+4n/an/an/an/an/an/a


TBA

Assay Description
Displacement of [3H]BRL49653 from Homo sapiens (human) PPARgamma receptor by scintillation proximity assay


Citation and Details

Article DOI: 10.1007/s00044-012-0285-6
BindingDB Entry DOI: 10.7270/Q2MG7SDK
More data for this
Ligand-Target Pair
G-protein coupled receptor 84


(Homo sapiens (Human))
BDBM50180948
PNG
(CHEBI:30805 | DODECANOATE | Dodecanoic Acid | Dode...)
Show SMILES CCCCCCCCCCCC(O)=O
Show InChI InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)
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Article
PubMed
n/an/an/an/a 8.80E+3n/an/an/an/a


TBA

Assay Description
Agonist activity at human GPR84 expressed in CHO cells assessed as reduction in forskolin-stimulated cAMP production preincubated for 20 mins followe...


Citation and Details

Article DOI: 10.1021/acs.jmedchem.0c01378
BindingDB Entry DOI: 10.7270/Q2VH5SHP
More data for this
Ligand-Target Pair
G-protein coupled receptor 84


(Homo sapiens (Human))
BDBM50180948
PNG
(CHEBI:30805 | DODECANOATE | Dodecanoic Acid | Dode...)
Show SMILES CCCCCCCCCCCC(O)=O
Show InChI InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)
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Article
PubMed
n/an/an/an/a 1.05E+4n/an/an/an/a


TBA

Assay Description
Agonist activity at human GPR84 expressed in CHO cell membranes assessed as induction of [35S]GTPgammaS incorporation incubated for 1 hr by liquid sc...


Citation and Details

Article DOI: 10.1021/acs.jmedchem.0c01378
BindingDB Entry DOI: 10.7270/Q2VH5SHP
More data for this
Ligand-Target Pair
UDP-3-O-acyl-N-acetylglucosamine deacetylase


(Aquifex aeolicus)
BDBM23434
PNG
(dodecanoate | dodecanoate, 3)
Show SMILES CCCCCCCCCCCC([O-])=O
Show InChI InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)/p-1
PDB
MMDB

KEGG

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Article
PubMed
n/an/an/a 900n/an/an/a7.030



University of San Francisco



Assay Description
Ligand binding to A. aeolicus LpxC was assayed by isothermal titration using isothermal microcalorimeter from Microcal, Inc. (Northampton, MA). The e...


Bioorg Med Chem 15: 2617-23 (2007)


Article DOI: 10.1016/j.bmc.2007.01.044
BindingDB Entry DOI: 10.7270/Q2TT4P8Q
More data for this
Ligand-Target Pair
G-protein coupled receptor 84


(Homo sapiens (Human))
BDBM50180948
PNG
(CHEBI:30805 | DODECANOATE | Dodecanoic Acid | Dode...)
Show SMILES CCCCCCCCCCCC(O)=O
Show InChI InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)
PDB

UniProtKB/SwissProt

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MCE
KEGG
PC cid
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UniChem

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Article
PubMed
n/an/an/an/a 8.87E+3n/an/an/an/a



University of Bonn

Curated by ChEMBL


Assay Description
Agonist activity at recombinant human GPR84 expressed in CHO cell membranes co-expressing beta-arrestin2 assessed as inhibition of forskolin-stimulat...


J Med Chem 63: 2391-2410 (2020)


Article DOI: 10.1021/acs.jmedchem.9b01339
BindingDB Entry DOI: 10.7270/Q2FJ2M3Q
More data for this
Ligand-Target Pair
G-protein coupled receptor 84


(Homo sapiens (Human))
BDBM50180948
PNG
(CHEBI:30805 | DODECANOATE | Dodecanoic Acid | Dode...)
Show SMILES CCCCCCCCCCCC(O)=O
Show InChI InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)
PDB

UniProtKB/SwissProt

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MCE
KEGG
PC cid
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PDB
UniChem

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Article
PubMed
n/an/an/an/a 3.49E+3n/an/an/an/a



University of Bonn

Curated by ChEMBL


Assay Description
Agonist activity at recombinant human GPR84 expressed in CHO cell membranes co-expressing beta-arrestin2 assessed as beta-arrestin 2 recruitment meas...


J Med Chem 63: 2391-2410 (2020)


Article DOI: 10.1021/acs.jmedchem.9b01339
BindingDB Entry DOI: 10.7270/Q2FJ2M3Q
More data for this
Ligand-Target Pair
Free fatty acid receptor 1


(Homo sapiens (Human))
BDBM50180948
PNG
(CHEBI:30805 | DODECANOATE | Dodecanoic Acid | Dode...)
Show SMILES CCCCCCCCCCCC(O)=O
Show InChI InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)
PDB

UniProtKB/SwissProt

antibodypedia
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MCE
KEGG
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Article
PubMed
n/an/an/an/a 759n/an/an/an/a



University of Southern Denmark

Curated by ChEMBL


Assay Description
Agonist activity at FFA1 receptor (unknown origin) expressed in human 132N1 cells measured for 90 secs by Fura-2 AM dye based calcium mobilization as...


J Med Chem 59: 4849-58 (2016)


Article DOI: 10.1021/acs.jmedchem.6b00202
BindingDB Entry DOI: 10.7270/Q24T6M9W
More data for this
Ligand-Target Pair
Free fatty acid receptor 1


(Homo sapiens (Human))
BDBM50180948
PNG
(CHEBI:30805 | DODECANOATE | Dodecanoic Acid | Dode...)
Show SMILES CCCCCCCCCCCC(O)=O
Show InChI InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)
PDB

UniProtKB/SwissProt

antibodypedia
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MCE
KEGG
PC cid
PC sid
PDB
UniChem

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Article
PubMed
n/an/an/an/a 7.94E+3n/an/an/an/a



University of Southern Denmark

Curated by ChEMBL


Assay Description
Agonist activity at human C-terminal eYFP-tagged FFA1 receptor expressed in HEK-293 cells assessed as beta-arrestin2 recruitment incubated for 5 mins...


J Med Chem 59: 4849-58 (2016)


Article DOI: 10.1021/acs.jmedchem.6b00202
BindingDB Entry DOI: 10.7270/Q24T6M9W
More data for this
Ligand-Target Pair