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Compile Data Set for Download or QSAR

Marvin 2D Structure

The following exact ligands are found in BindingDB

Wt: 304.3
BDBM50138701

Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB (change energy unit to kcal/mol)

Found 16 hits in this display   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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Article
PubMed
38.2n/an/an/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
Inhibitory activity against wild-type dihydrofolate reductase (S108N DHFR)


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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PubMed
520n/an/an/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
Inhibitory activity against double mutant dihydrofolate reductase (C59R+S108N DHFR)


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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1.36E+3n/an/an/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
Inhibitory activity against triple mutant dihydrofolate reductase (C59R S108 NI164L DHFR)


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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1.63E+3n/an/an/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
Inhibitory activity against quadruple mutant dihydrofolate reductase (N51I C59R S108N I164L DHFR)


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Dihydrofolate reductase


(Escherichia coli)
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
MMDB

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n/an/a 100n/an/an/an/an/an/a



TBA

Curated by ChEMBL


Assay Description
Inhibition against dihydrofolate reductase enzyme of Escherichia coli


J Med Chem 23: 535-41 (1980)


BindingDB Entry DOI: 10.7270/Q2TX3GJG
More data for this
Ligand-Target Pair
Dihydrofolate reductase


(Escherichia coli)
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
MMDB

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n/an/a 100n/an/an/an/an/an/a



University of Illinois at Chicago 60612

Curated by ChEMBL


Assay Description
Compound was tested for inhibition of Escherichia coli Dihydrofolate reductase.


J Med Chem 39: 4825-32 (1996)


Article DOI: 10.1021/jm960491r
BindingDB Entry DOI: 10.7270/Q2668GXG
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium berghei (strain Anka))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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n/an/a 340n/an/an/an/an/an/a



TBA

Curated by ChEMBL


Assay Description
Compound was tested for its inhibition against dihydrofolate reductase enzyme of Plasmodium berghei


J Med Chem 23: 535-41 (1980)


BindingDB Entry DOI: 10.7270/Q2TX3GJG
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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Article
PubMed
n/an/a 500n/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
In vitro antimalarial activity against Plasmodium falciparum Vl/S strain with quadruple mutation (N51I + C59R + S108N + I164L) DHFR, relative to trim...


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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Article
PubMed
n/an/a>730n/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
In vitro antimalarial activity against Plasmodium falciparum K1CB1 strain with double mutation (C59R + S108N) DHFR, relative to trimethoprim


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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Article
PubMed
n/an/a 760n/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
In vitro antimalarial activity against Plasmodium falciparum Csl-2 strain with triple mutation (C59R + S108N + I164L) DHFR, relative to trimethoprim


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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PubMed
n/an/a 3.41E+3n/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
In vitro antimalarial activity against Plasmodium falciparum TM4/8.2 strain with wild type DHFR, relative to trimethoprim


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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n/an/a 2.27E+4n/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
In vitro antimalarial activity against Plasmodium falciparum TM4/8.2 strain with wild type DHFR


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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n/an/a 9.08E+4n/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
In vitro antimalarial activity against Plasmodium falciparum Csl-2 strain with triple mutation (C59R + S108N + I164L) DHFR


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
PDB
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PubMed
n/an/a>1.00E+5n/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
In vitro antimalarial activity against Plasmodium falciparum Vl/S strain with quadruple mutation (N51I + C59R + S108N + I164L) DHFR


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Plasmodium falciparum (isolate K1 / Thailand))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
PDB
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PubMed
n/an/a>1.00E+5n/an/an/an/an/an/a



National Center for Genetic Engineering and Biotechnology

Curated by ChEMBL


Assay Description
In vitro antimalarial activity against Plasmodium falciparum K1CB1 strain with double mutation (C59R + S108N) DHFR


J Med Chem 47: 345-54 (2004)


Article DOI: 10.1021/jm0303352
BindingDB Entry DOI: 10.7270/Q237784Q
More data for this
Ligand-Target Pair
Dihydrofolate reductase


(Rattus norvegicus (rat))
BDBM50138701
PNG
(6-Methyl-5-(3,4,5-trimethoxy-benzyl)-pyrimidine-2,...)
Show SMILES COc1cc(Cc2c(C)nc(N)nc2N)cc(OC)c1OC
Show InChI InChI=1S/C15H20N4O3/c1-8-10(14(16)19-15(17)18-8)5-9-6-11(20-2)13(22-4)12(7-9)21-3/h6-7H,5H2,1-4H3,(H4,16,17,18,19)
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n/an/a>4.00E+5n/an/an/an/an/an/a



TBA

Curated by ChEMBL


Assay Description
Inhibition against dihydrofolate reductase enzyme of rat liver


J Med Chem 23: 535-41 (1980)


BindingDB Entry DOI: 10.7270/Q2TX3GJG
More data for this
Ligand-Target Pair