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PDB code 3F68

Compile Data Set for Download or QSAR

Identical Ligands in BindingDB

Found 1 hit Enzyme Inhibition Constant Data   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Prothrombin

  (259/259 = 100%)
(Homo sapiens (Human))
BDBM32659
PNG
(m-chlorobenzylamide, 8)
Show SMILES CC(=O)N[C@H](CC1CCCCC1)C(=O)N1CCCC1C(=O)NCc1cccc(Cl)c1 |r|
Show InChI InChI=1S/C23H32ClN3O3/c1-16(28)26-20(14-17-7-3-2-4-8-17)23(30)27-12-6-11-21(27)22(29)25-15-18-9-5-10-19(24)13-18/h5,9-10,13,17,20-21H,2-4,6-8,11-12,14-15H2,1H3,(H,25,29)(H,26,28)/t20-,21?/m1/s1
PDB

UniProtKB/SwissProt

antibodypedia
GoogleScholar
AffyNet 
PC cid
PC sid
PDB
UniChem

Similars

PDB
Article
PubMed
8.70E+3 -28.9n/an/an/an/an/a7.425



Philipps-University Marburg



Assay Description
Kinetic inhibition of human thrombin was determined photometrically at 405 nm using the chromogenic substrate Pefachrom tPa. Reactions were performed...


J Mol Biol 391: 552-64 (2009)


Article DOI: 10.1016/j.jmb.2009.06.016
BindingDB Entry DOI: 10.7270/Q2RV0M1Z
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)

Identical Ligands in BindingDB

Found 3 hits Isothermal Titration Calorimetry Data
Cell (A)Syringe (B)Cell
Links
Syringe
Links
Cell + Syr
Links
ΔG°
kJ/mole
-TΔS°
kJ/mole
ΔH°
kJ/mole
log KpHTemp
°C
Thrombin  (259/259 = 100%)

(Homo sapiens (Human))
BDBM32659
JPEG
(m-chlorobenzylamide, 8)
GoogleScholar
PDB
PC cid
PC sid
PDB
-33.1-15.6-17.4n/a7.8025



Philipps-University Marburg





J Mol Biol 391: 552-64 (2009)

Thrombin  (259/259 = 100%)

(Homo sapiens (Human))
BDBM32659
JPEG
(m-chlorobenzylamide, 8)
GoogleScholar
PDB
PC cid
PC sid
PDB
-32.8-18.5-14.3n/a7.8025



Philipps-University Marburg





J Mol Biol 391: 552-64 (2009)

Thrombin  (259/259 = 100%)

(Homo sapiens (Human))
BDBM32659
JPEG
(m-chlorobenzylamide, 8)
GoogleScholar
PDB
PC cid
PC sid
PDB
-32.6-3.61-29n/a7.8025



Philipps-University Marburg





J Mol Biol 391: 552-64 (2009)


Similar Ligands in BindingDB*

Found 3 hits Isothermal Titration Calorimetry Data
Cell (A)Syringe (B)Cell
Links
Syringe
Links
Cell + Syr
Links
ΔG°
kJ/mole
-TΔS°
kJ/mole
ΔH°
kJ/mole
log KpHTemp
°C
Thrombin  (259/259 = 100%)

(Homo sapiens (Human))
BDBM32659
JPEG
(m-chlorobenzylamide, 8)
GoogleScholar
PDB
PC cid
PC sid
PDB
-33.1-15.6-17.4n/a7.8025



Philipps-University Marburg





J Mol Biol 391: 552-64 (2009)

Thrombin  (259/259 = 100%)

(Homo sapiens (Human))
BDBM32659
JPEG
(m-chlorobenzylamide, 8)
GoogleScholar
PDB
PC cid
PC sid
PDB
-32.8-18.5-14.3n/a7.8025



Philipps-University Marburg





J Mol Biol 391: 552-64 (2009)

Thrombin  (259/259 = 100%)

(Homo sapiens (Human))
BDBM32659
JPEG
(m-chlorobenzylamide, 8)
GoogleScholar
PDB
PC cid
PC sid
PDB
-32.6-3.61-29n/a7.8025



Philipps-University Marburg





J Mol Biol 391: 552-64 (2009)

Search BindingMOAD for More Affinity Data:

* indicates data uncertainty>20%
* 0.9 Tanimoto similarity
Identities from BLAST output