BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetRecBCD enzyme subunit RecD
LigandBDBM77606
Substrate/Competitorn/a
Meas. Tech.Counterscreen for AddAB inhibitors: absorbance-based bacterial cell-based high throughput dose response assay to identify inhibitors of RecBCD
IC50 15157±n/a nM
Citation PubChem, PC Counterscreen for AddAB inhibitors: absorbance-based bacterial cell-based high throughput dose response assay to identify inhibitors of RecBCD PubChem Bioassay(2010)[AID]
More Info.:Get all data from this article,   Solution Info,  Assay Method
 
RecBCD enzyme subunit RecD
Name:RecBCD enzyme subunit RecD
Synonyms:RECD_ECOLI | exonuclease V (RecBCD complex), alpha chain | hopE | recD
Type:Enzyme Catalytic Domain
Mol. Mass.:66906.68
Organism:Escherichia coli str. K-12 substr. MG1655
Description:gi_16130723
Residue:608
Sequence:
MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLEN
NEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVA
RFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTT
VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQ
LASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYR
FGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLD
LLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGR
PVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHK
SQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGL
AALFSSRE
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM77606
n/a
NameBDBM77606
Synonyms:(5S)-1-[[(2S)-1-[(2S)-2-[(4R)-2-azanylidene-4-[(2R)-butan-2-yl]-3-(3-cyclopentylpropyl)imidazolidin-1-yl]pentyl]pyrrolidin-2-yl]methyl]-5-(phenylmethyl)-4,5-dihydroimidazol-2-amine | (5S)-1-[[(2S)-1-[(2S)-2-[(4R)-4-[(2R)-butan-2-yl]-3-(3-cyclopentylpropyl)-2-imino-1-imidazolidinyl]pentyl]-2-pyrrolidinyl]methyl]-5-(phenylmethyl)-4,5-dihydroimidazol-2-amine | (5S)-5-benzyl-1-[[(2S)-1-[(2S)-2-[(4R)-4-[(2R)-butan-2-yl]-3-(3-cyclopentylpropyl)-2-iminoimidazolidin-1-yl]pentyl]pyrrolidin-2-yl]methyl]-4,5-dihydroimidazol-2-amine | MLS002471776 | SMR001395191 | [(5S)-5-benzyl-1-[[(2S)-1-[(2S)-2-[(4R)-3-(3-cyclopentylpropyl)-2-imino-4-[(1R)-1-methylpropyl]imidazolidin-1-yl]pentyl]pyrrolidin-2-yl]methyl]-2-imidazolin-2-yl]amine | cid_44143147
TypeSmall organic molecule
Emp. Form.C35H59N7
Mol. Mass.577.8899
SMILESCCC[C@@H](CN1CCC[C@H]1CN1[C@@H](Cc2ccccc2)CN=C1N)N1C[C@@H]([C@H](C)CC)N(CCCC2CCCC2)C1=N |c:23|
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: