Ki Summary BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetGag-Pol polyprotein [1148-1435]
LigandBDBM23400
Substrate/CompetitorDIG-tagged Target DNA
Meas. Tech.Integrase 3-End Joining Assay
pH7.3±n/a
Temperature295.15±n/a K
IC50 26±3 nM
Citation Chen, XTsiang, MYu, FHung, MJones, GSZeynalzadegan, AQi, XJin, HKim, CUSwaminathan, SChen, JM Modeling, analysis, and validation of a novel HIV integrase structure provide insights into the binding modes of potent integrase inhibitors. J Mol Biol380:504-19 (2008) [PubMed]  Article
More Info.:Get all data from this article,   Solution Info,  Assay Method
 
Gag-Pol polyprotein [1148-1435]
Name:Gag-Pol polyprotein [1148-1435]
Synonyms:HIV-1 Integrase | POL_HV1H2 | gag-pol
Type:Enzyme
Mol. Mass.:32171.42
Organism:Human immunodeficiency virus type 1
Description:The sequence encoding the 288-amino-acid wild-type full-length integrase was cloned with an N-terminal 6His tag, and expressed in E. coli.
Residue:288
Sequence:
FLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGI
WQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSN
FTGATVRAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV
FIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRNPLWKGPAK
LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM23400
DIG-tagged Target DNA
Name:DIG-tagged Target DNA
Synonyms:digoxin-tagged DNA
Type:Duplex DNA
Mol. Mass.:1978.21
Organism:n/a
Description:The biotinylated donor DNA was bound to streptavidin-coated plates.
Residue:23
Sequence:
5-TGACCAAGGGCTAATTCACT-3-DIG