Ki Summary BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetDNA polymerase III subunit tau
LigandBDBM36324
Substrate/CompetitorBDBM50118233
Meas. Tech.colorimetric ATPase assay
pH7.5±0
Temperature310.15±0 K
Ki 8.1e+3± 2.3e+3 nM
Citation Eng, KScouten-Ponticelli, SKSutton, MBerdis, A Selective Inhibition of DNA Replicase Assembly by a Non-natural Nucleotide: Exploiting the Structural Diversity of ATP-Binding Sites ACS Chem Biol5:183-94 (2010) [PubMed]  Article
More Info.:Get all data from this article,   Solution Info,  Assay Method
 
DNA polymerase III subunit tau
Name:DNA polymerase III subunit tau
Synonyms:ATP-dependent clamp loader gamma -complex | DNA polymerase III subunit gamma | DPO3X_ECOLI | dnaX | dnaZ | dnaZX
Type:PROTEIN
Mol. Mass.:71139.93
Organism:Escherichia coli
Description:P06710
Residue:643
Sequence:
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM
LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA
ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH
PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ
RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA
TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA
LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL
EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM36324
BDBM50118233
NameBDBM36324
Synonyms:6-nitro-indolyl- 2'-deoxyriboside triphosphate | d6-NITP
TypeSmall organic molecule
Emp. Form.C13H17N2O14P3
Mol. Mass.518.2004
SMILES[H][C@]1(O)C[C@@]([H])(O[C@]1([H])COP(O)(=O)OP(O)(=O)OP(O)(O)=O)n1ccc2ccc(cc12)[N+]([O-])=O
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: