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Compile Data Set for Download or QSAR

Marvin 2D Structure

The following exact ligands are found in BindingDB

Wt: 295.3
BDBM50033552

Activity Spreadsheet -- Enzyme Inhibition Constant Data from BindingDB (change energy unit to kcal/mol)

Found 6 hits in this display   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
Bifunctional dihydrofolate reductase-thymidylate synthase


(Toxoplasma gondii)
BDBM50033552
PNG
(6-(2,3-Dihydro-indol-1-ylmethyl)-5,6,7,8-tetrahydr...)
Show SMILES Nc1nc(N)c2CC(CN3CCc4ccccc34)CCc2n1
Show InChI InChI=1S/C17H21N5/c18-16-13-9-11(5-6-14(13)20-17(19)21-16)10-22-8-7-12-3-1-2-4-15(12)22/h1-4,11H,5-10H2,(H4,18,19,20,21)
PDB

UniProtKB/SwissProt

GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

PubMed
n/an/a 27n/an/an/an/an/an/a



Duquesne University

Curated by ChEMBL


Assay Description
Inhibitory activity against purified DHFR (Dihydrofolate reductase) from Toxoplasma gondii.


J Med Chem 38: 3660-8 (1995)


BindingDB Entry DOI: 10.7270/Q27080FN
More data for this
Ligand-Target Pair
Bifunctional dihydrofolate reductase-thymidylate synthase


(Toxoplasma gondii)
BDBM50033552
PNG
(6-(2,3-Dihydro-indol-1-ylmethyl)-5,6,7,8-tetrahydr...)
Show SMILES Nc1nc(N)c2CC(CN3CCc4ccccc34)CCc2n1
Show InChI InChI=1S/C17H21N5/c18-16-13-9-11(5-6-14(13)20-17(19)21-16)10-22-8-7-12-3-1-2-4-15(12)22/h1-4,11H,5-10H2,(H4,18,19,20,21)
PDB

UniProtKB/SwissProt

GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a 27n/an/an/an/an/an/a



Duquesne University

Curated by ChEMBL


Assay Description
Inhibition of Toxoplasma gondii dihydrofolate reductase


J Med Chem 48: 1448-69 (2005)


Article DOI: 10.1021/jm040153n
BindingDB Entry DOI: 10.7270/Q2V40TQ3
More data for this
Ligand-Target Pair
Dihydrofolate reductase


(Rattus norvegicus (rat))
BDBM50033552
PNG
(6-(2,3-Dihydro-indol-1-ylmethyl)-5,6,7,8-tetrahydr...)
Show SMILES Nc1nc(N)c2CC(CN3CCc4ccccc34)CCc2n1
Show InChI InChI=1S/C17H21N5/c18-16-13-9-11(5-6-14(13)20-17(19)21-16)10-22-8-7-12-3-1-2-4-15(12)22/h1-4,11H,5-10H2,(H4,18,19,20,21)
PDB
MMDB

Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

PubMed
n/an/a 160n/an/an/an/an/an/a



Duquesne University

Curated by ChEMBL


Assay Description
Inhibitory activity against purified DHFR (Dihydrofolate reductase) from rat


J Med Chem 38: 3660-8 (1995)


BindingDB Entry DOI: 10.7270/Q27080FN
More data for this
Ligand-Target Pair
Dihydrofolate reductase


(Rattus norvegicus (rat))
BDBM50033552
PNG
(6-(2,3-Dihydro-indol-1-ylmethyl)-5,6,7,8-tetrahydr...)
Show SMILES Nc1nc(N)c2CC(CN3CCc4ccccc34)CCc2n1
Show InChI InChI=1S/C17H21N5/c18-16-13-9-11(5-6-14(13)20-17(19)21-16)10-22-8-7-12-3-1-2-4-15(12)22/h1-4,11H,5-10H2,(H4,18,19,20,21)
PDB
MMDB

Reactome pathway
KEGG

UniProtKB/SwissProt

B.MOAD
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a 160n/an/an/an/an/an/a



Duquesne University

Curated by ChEMBL


Assay Description
Inhibition of rat liver dihydrofolate reductase


J Med Chem 48: 1448-69 (2005)


Article DOI: 10.1021/jm040153n
BindingDB Entry DOI: 10.7270/Q2V40TQ3
More data for this
Ligand-Target Pair
Dihydrofolate reductase


(Pneumocystis carinii)
BDBM50033552
PNG
(6-(2,3-Dihydro-indol-1-ylmethyl)-5,6,7,8-tetrahydr...)
Show SMILES Nc1nc(N)c2CC(CN3CCc4ccccc34)CCc2n1
Show InChI InChI=1S/C17H21N5/c18-16-13-9-11(5-6-14(13)20-17(19)21-16)10-22-8-7-12-3-1-2-4-15(12)22/h1-4,11H,5-10H2,(H4,18,19,20,21)
PDB
MMDB

UniProtKB/SwissProt

B.MOAD
DrugBank
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a 210n/an/an/an/an/an/a



Duquesne University

Curated by ChEMBL


Assay Description
Inhibition of Pneumocystis carinii dihydrofolate reductase


J Med Chem 48: 1448-69 (2005)


Article DOI: 10.1021/jm040153n
BindingDB Entry DOI: 10.7270/Q2V40TQ3
More data for this
Ligand-Target Pair
Dihydrofolate reductase


(Pneumocystis carinii)
BDBM50033552
PNG
(6-(2,3-Dihydro-indol-1-ylmethyl)-5,6,7,8-tetrahydr...)
Show SMILES Nc1nc(N)c2CC(CN3CCc4ccccc34)CCc2n1
Show InChI InChI=1S/C17H21N5/c18-16-13-9-11(5-6-14(13)20-17(19)21-16)10-22-8-7-12-3-1-2-4-15(12)22/h1-4,11H,5-10H2,(H4,18,19,20,21)
PDB
MMDB

UniProtKB/SwissProt

B.MOAD
DrugBank
GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

PubMed
n/an/a 210n/an/an/an/an/an/a



Duquesne University

Curated by ChEMBL


Assay Description
Inhibitory activity against purified DHFR (Dihydrofolate reductase) from Pneumocystis carinii.


J Med Chem 38: 3660-8 (1995)


BindingDB Entry DOI: 10.7270/Q27080FN
More data for this
Ligand-Target Pair