Ki Summary BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetCollagenase 3
LigandBDBM50026702
Substrate/Competitorn/a
Meas. Tech.ChEMBL_798828 (CHEMBL1943704)
IC50 40±n/a nM
Citation De Savi, CMorley, ADNash, IKaroutchi, GPage, KTing, AGerhardt, S Lead optimisation of selective non-zinc binding inhibitors of MMP13. Part 2. Bioorg Med Chem Lett22:271-7 (2011) [PubMed]  Article
More Info.:Get all data from this article,  Assay Method
 
Collagenase 3
Name:Collagenase 3
Synonyms:MMP-13 | MMP13 | MMP13_HUMAN | Matrix metalloproteinase-13 | Matrix metalloproteinase-13 (MMP-13) | Matrix metalloproteinase-13 (MMP13)
Type:Enzyme
Mol. Mass.:53808.06
Organism:Homo sapiens (Human)
Description:P45452
Residue:471
Sequence:
MHPGVLAAFLFLSWTHCRALPLPSGGDEDDLSEEDLQFAERYLRSYYHPTNLAGILKENA
ASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPDVGEYNVFPRTLKWSKMNLTY
RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDG
PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALM
FPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLSLDAITSLRGET
MIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALNGY
DILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLI
EEDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPANSILWC
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM50026702
n/a
NameBDBM50026702
Synonyms:CHEMBL1940289
TypeSmall organic molecule
Emp. Form.C31H32N2O5
Mol. Mass.512.5962
SMILESCOc1ccc(CNC(=O)c2ccc(Oc3ccc(cc3)C#C[C@]3(O)CN4CCC3CC4)cc2)c(OC)c1 |r,wU:23.24,(-12,-25.21,;-10.68,-25.99,;-9.34,-25.22,;-8,-25.99,;-6.67,-25.22,;-6.66,-23.68,;-5.32,-22.92,;-3.99,-23.69,;-2.65,-22.93,;-2.65,-21.39,;-1.32,-23.71,;.02,-22.94,;1.35,-23.72,;1.34,-25.26,;2.67,-26.03,;4.01,-25.27,;4.02,-23.73,;5.35,-22.97,;6.68,-23.75,;6.68,-25.28,;5.34,-26.05,;8.02,-22.99,;9.36,-22.23,;10.67,-21.45,;10.65,-22.97,;10.64,-19.92,;11.96,-19.15,;14.08,-19.57,;14.11,-21.74,;11.99,-22.19,;13.28,-21.41,;13.26,-19.91,;.01,-26.02,;-1.32,-25.25,;-8,-22.91,;-7.99,-21.37,;-6.65,-20.6,;-9.33,-23.67,)|
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: