Ki Summary BindingDB logo
myBDB logout
Reaction Details
Report a problem with these data
TargetHistone deacetylase
LigandBDBM50048864
Substrate/Competitorn/a
Meas. Tech.ChEMBL_1750439 (CHEMBL4185199)
IC50 0.900000±n/a nM
Citation Hailu, GSRobaa, DForgione, MSippl, WRotili, DMai, A Lysine Deacetylase Inhibitors in Parasites: Past, Present, and Future Perspectives. J Med Chem60:4780-4804 (2017) [PubMed]  Article
More Info.:Get all data from this article,  Assay Method
 
Histone deacetylase
Name:Histone deacetylase
Synonyms:Histone Deacetylase (pfHDAC-1)
Type:Enzyme
Mol. Mass.:51371.91
Organism:Plasmodium falciparum (isolate 3D7)
Description:Assays were performed using recombinant pfHDAC-1 expressed and purified from S2 insect cells.
Residue:449
Sequence:
MSNRKKVAYFHDPDIGSYYYGAGHPMKPQRIRMTHSLIVSYNLYKYMEVYRPHKSDVNEL
TLFHDYEYIDFLSSISLENYREFTYQLKRFNVGEATDCPVFDGLFQFQQSCAGASIDGAS
KLNHHCADICVNWSGGLHHAKMSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDG
VEEAFYVTHRVMTVSFHKFGDYFPGTGDITDVGVNHGKYYSVNVPLNDGMTDDAFVDLFK
VVIDKCVQTYRPGAIIIQCGADSLTGDRLGRFNLTIKGHARCVEHVRSYNIPLLVLGGGG
YTIRNVSRCWAYETGVVLNKHHEMPDQISLNDYYDYYAPDFQLHLQPSNIPNYNSPEHLS
RIKMKIAENLRHIEHAPGVQFSYVPPDFFNSDIDDESDKNQYELKDDSGGGRAPGTRAKE
HSTTHHLRRKNYDDDFFDLSDRDQSIVPY
Blast this sequence in BindingDB or PDB
  Blast E-value cutoff:
BDBM50048864
n/a
NameBDBM50048864
Synonyms:CHEMBL3310505
TypeSmall organic molecule
Emp. Form.C24H36N4O6S2
Mol. Mass.540.696
SMILES[H][C@@]12CC(=O)N[C@H](C(C)C)C(=O)N[C@]([H])(CSSCC\C=C\1)C(=O)N\C(=C/C)C(=O)N[C@@H](C(C)C)C(=O)O2 |r,t:20|
Structure
Search PDB for entries with ligand similarity:Similarity to this molecule at least: