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Compile Data Set for Download or QSAR

Found 909 hits Enz. Inhib. hit(s) with Target = 'Phosphoglycerate dehydrogenase (PHGDH)'   
Target/Host
(Institution)
LigandTarget/Host
Links
Ligand
Links
Trg + Lig
Links
Ki
nM
ΔG°
kJ/mole
IC50
nM
Kd
nM
EC50/IC50
nM
koff
s-1
kon
M-1s-1
pHTemp
°C
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50230355
PNG
(CHEMBL4061884)
Show SMILES OCCNC(=O)COc1cc2[nH]c(cc2cc1Cl)C(=O)N[C@H](CO)c1ccc(cc1)C(O)=O |r|
Show InChI InChI=1S/C22H22ClN3O7/c23-15-7-14-8-17(25-16(14)9-19(15)33-11-20(29)24-5-6-27)21(30)26-18(10-28)12-1-3-13(4-2-12)22(31)32/h1-4,7-9,18,25,27-28H,5-6,10-11H2,(H,24,29)(H,26,30)(H,31,32)/t18-/m1/s1
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n/an/an/a 180n/an/an/an/an/a



Boehringer Ingelheim RCV GmbH & Co. KG

Curated by ChEMBL


Assay Description
Binding affinity to PHGDH (unknown origin)


J Med Chem 62: 7976-7997 (2019)


Article DOI: 10.1021/acs.jmedchem.9b00718
BindingDB Entry DOI: 10.7270/Q25H7KNJ
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50230355
PNG
(CHEMBL4061884)
Show SMILES OCCNC(=O)COc1cc2[nH]c(cc2cc1Cl)C(=O)N[C@H](CO)c1ccc(cc1)C(O)=O |r|
Show InChI InChI=1S/C22H22ClN3O7/c23-15-7-14-8-17(25-16(14)9-19(15)33-11-20(29)24-5-6-27)21(30)26-18(10-28)12-1-3-13(4-2-12)22(31)32/h1-4,7-9,18,25,27-28H,5-6,10-11H2,(H,24,29)(H,26,30)(H,31,32)/t18-/m1/s1
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n/an/an/a 180n/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Binding affinity to PHGDH (unknown origin) by SPR assay


J Med Chem 60: 1591-1597 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01166
BindingDB Entry DOI: 10.7270/Q21N83CP
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50230355
PNG
(CHEMBL4061884)
Show SMILES OCCNC(=O)COc1cc2[nH]c(cc2cc1Cl)C(=O)N[C@H](CO)c1ccc(cc1)C(O)=O |r|
Show InChI InChI=1S/C22H22ClN3O7/c23-15-7-14-8-17(25-16(14)9-19(15)33-11-20(29)24-5-6-27)21(30)26-18(10-28)12-1-3-13(4-2-12)22(31)32/h1-4,7-9,18,25,27-28H,5-6,10-11H2,(H,24,29)(H,26,30)(H,31,32)/t18-/m1/s1
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n/an/an/a 180n/an/an/an/an/a



National Center for Advancing Translational Sciences

Curated by ChEMBL


Assay Description
Binding affinity to PHGDH (unknown origin) by surface plasma resonance method


Bioorg Med Chem 26: 1727-1739 (2018)


Article DOI: 10.1016/j.bmc.2018.02.016
BindingDB Entry DOI: 10.7270/Q2542R3R
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50230355
PNG
(CHEMBL4061884)
Show SMILES OCCNC(=O)COc1cc2[nH]c(cc2cc1Cl)C(=O)N[C@H](CO)c1ccc(cc1)C(O)=O |r|
Show InChI InChI=1S/C22H22ClN3O7/c23-15-7-14-8-17(25-16(14)9-19(15)33-11-20(29)24-5-6-27)21(30)26-18(10-28)12-1-3-13(4-2-12)22(31)32/h1-4,7-9,18,25,27-28H,5-6,10-11H2,(H,24,29)(H,26,30)(H,31,32)/t18-/m1/s1
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n/an/an/a 180n/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Binding affinity to PHGDH (unknown origin) by surface plasma resonance method


J Med Chem 60: 1227-1237 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01167
BindingDB Entry DOI: 10.7270/Q2VM4FH6
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM209927
PNG
(PKUMDL-WQ-2203)
Show SMILES OC(=O)CSC1=C(SCC(O)=O)C(=O)C(SCC(O)=O)=C(SCC(O)=O)C1=O |c:5,t:19|
Show InChI InChI=1S/C14H12O10S4/c15-5(16)1-25-11-9(23)13(27-3-7(19)20)14(28-4-8(21)22)10(24)12(11)26-2-6(17)18/h1-4H2,(H,15,16)(H,17,18)(H,19,20)(H,21,22)
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n/an/an/a 7.22E+3n/an/an/a7.4n/a



Peking University



Assay Description
The binding affinities of compounds towards PHGDH were assayed using the SPR-based Biacore T200 instrument (GE Healthcare). PHGDH was immobilized on ...


Cell Chem Biol 24: 55-65 (2017)


Article DOI: 10.1016/j.chembiol.2016.11.013
BindingDB Entry DOI: 10.7270/Q2X63KR3
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50607970
PNG
(CHEMBL5270272)
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n/an/an/a 1.52E+4n/an/an/an/an/a


TBA



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More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM209926
PNG
(PKUMDL-WQ-2202)
Show SMILES Cc1c(\N=N\c2cccc(c2)C(O)=O)c(O)[nH]c(=O)c1C#N
Show InChI InChI=1S/C14H10N4O4/c1-7-10(6-15)12(19)16-13(20)11(7)18-17-9-4-2-3-8(5-9)14(21)22/h2-5H,1H3,(H,21,22)(H2,16,19,20)/b18-17+
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n/an/an/a 2.90E+4n/an/an/a7.4n/a



Peking University



Assay Description
The binding affinities of compounds towards PHGDH were assayed using the SPR-based Biacore T200 instrument (GE Healthcare). PHGDH was immobilized on ...


Cell Chem Biol 24: 55-65 (2017)


Article DOI: 10.1016/j.chembiol.2016.11.013
BindingDB Entry DOI: 10.7270/Q2X63KR3
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM209925
PNG
(PKUMDL-WQ-2201)
Show SMILES CCNC(=S)N\N=C/c1ccc(o1)-c1ccc(C(O)=O)c(Cl)c1
Show InChI InChI=1S/C15H14ClN3O3S/c1-2-17-15(23)19-18-8-10-4-6-13(22-10)9-3-5-11(14(20)21)12(16)7-9/h3-8H,2H2,1H3,(H,20,21)(H2,17,19,23)/b18-8-
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n/an/an/a 6.69E+4n/an/an/a7.4n/a



Peking University



Assay Description
The binding affinities of compounds towards PHGDH were assayed using the SPR-based Biacore T200 instrument (GE Healthcare). PHGDH was immobilized on ...


Cell Chem Biol 24: 55-65 (2017)


Article DOI: 10.1016/j.chembiol.2016.11.013
BindingDB Entry DOI: 10.7270/Q2X63KR3
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50519097
PNG
(CHEMBL4574949)
Show SMILES Cn1nc(cc1C(=O)NC1CC1)-c1ccccc1
Show InChI InChI=1S/C14H15N3O/c1-17-13(14(18)15-11-7-8-11)9-12(16-17)10-5-3-2-4-6-10/h2-6,9,11H,7-8H2,1H3,(H,15,18)
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n/an/an/a 1.05E+5n/an/an/an/an/a



Boehringer Ingelheim RCV GmbH & Co. KG

Curated by ChEMBL


Assay Description
Binding affinity to N-terminal His6-tagged human PHGDH (4 to 315 residues)by SPR assay


J Med Chem 62: 7976-7997 (2019)


Article DOI: 10.1021/acs.jmedchem.9b00718
BindingDB Entry DOI: 10.7270/Q25H7KNJ
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50519142
PNG
(CHEMBL4548832)
Show SMILES Cn1c(cc2ccccc12)C(=O)Nc1cccc(c1)C(O)=O
Show InChI InChI=1S/C17H14N2O3/c1-19-14-8-3-2-5-11(14)10-15(19)16(20)18-13-7-4-6-12(9-13)17(21)22/h2-10H,1H3,(H,18,20)(H,21,22)
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n/an/an/a 1.44E+5n/an/an/an/an/a



Boehringer Ingelheim RCV GmbH & Co. KG

Curated by ChEMBL


Assay Description
Binding affinity to N-terminal His6-tagged human PHGDH (4 to 315 residues)by SPR assay


J Med Chem 62: 7976-7997 (2019)


Article DOI: 10.1021/acs.jmedchem.9b00718
BindingDB Entry DOI: 10.7270/Q25H7KNJ
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50607972
PNG
(Benzo[B]Thiophene-2-Carboxamide | CHEMBL538197)
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n/an/an/a 4.70E+5n/an/an/an/an/a


TBA



Citation and Details
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232876
PNG
(CHEMBL4094048)
Show SMILES COc1ccc(NC(C)=O)cc1Cl
Show InChI InChI=1S/C9H10ClNO2/c1-6(12)11-7-3-4-9(13-2)8(10)5-7/h3-5H,1-2H3,(H,11,12)
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n/an/an/a 1.30E+6n/an/an/an/an/a


TBA



Citation and Details
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232879
PNG
(CHEMBL326430)
Show SMILES Cc1cccc2cc[nH]c12
Show InChI InChI=1S/C9H9N/c1-7-3-2-4-8-5-6-10-9(7)8/h2-6,10H,1H3
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n/an/an/a 1.50E+6n/an/an/an/an/a


TBA



Citation and Details
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232874
PNG
(CHEMBL4074617)
Show SMILES NC(=O)c1ccc(F)c(Cl)c1
Show InChI InChI=1S/C7H5ClFNO/c8-5-3-4(7(10)11)1-2-6(5)9/h1-3H,(H2,10,11)
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n/an/an/a 1.50E+6n/an/an/an/an/a



Boehringer Ingelheim RCV GmbH & Co. KG

Curated by ChEMBL


Assay Description
Binding affinity to human PHGDH ( 1 to 533 residues) expressed in Escherichia coli Rosetta (DE3) by Sypro-orange dye based differential scanning fluo...


J Med Chem 62: 7976-7997 (2019)


Article DOI: 10.1021/acs.jmedchem.9b00718
BindingDB Entry DOI: 10.7270/Q25H7KNJ
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232879
PNG
(CHEMBL326430)
Show SMILES Cc1cccc2cc[nH]c12
Show InChI InChI=1S/C9H9N/c1-7-3-2-4-8-5-6-10-9(7)8/h2-6,10H,1H3
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n/an/an/a 1.50E+6n/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Binding affinity to human N-terminal His6-tagged truncated PHGDH (3 to 314 residues) expressed in Escherichia coli Rosetta (DE3) by ITC assay


J Med Chem 60: 1227-1237 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01167
BindingDB Entry DOI: 10.7270/Q2VM4FH6
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232874
PNG
(CHEMBL4074617)
Show SMILES NC(=O)c1ccc(F)c(Cl)c1
Show InChI InChI=1S/C7H5ClFNO/c8-5-3-4(7(10)11)1-2-6(5)9/h1-3H,(H2,10,11)
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n/an/an/a 1.60E+6n/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Binding affinity to human N-terminal His6-tagged truncated PHGDH (3 to 314 residues) expressed in Escherichia coli Rosetta (DE3) by ITC assay


J Med Chem 60: 1227-1237 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01167
BindingDB Entry DOI: 10.7270/Q2VM4FH6
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232874
PNG
(CHEMBL4074617)
Show SMILES NC(=O)c1ccc(F)c(Cl)c1
Show InChI InChI=1S/C7H5ClFNO/c8-5-3-4(7(10)11)1-2-6(5)9/h1-3H,(H2,10,11)
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n/an/an/a 1.60E+6n/an/an/an/an/a


TBA



Citation and Details
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232876
PNG
(CHEMBL4094048)
Show SMILES COc1ccc(NC(C)=O)cc1Cl
Show InChI InChI=1S/C9H10ClNO2/c1-6(12)11-7-3-4-9(13-2)8(10)5-7/h3-5H,1-2H3,(H,11,12)
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n/an/an/a 2.80E+6n/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Binding affinity to human N-terminal His6-tagged truncated PHGDH (3 to 314 residues) expressed in Escherichia coli Rosetta (DE3) by ITC assay


J Med Chem 60: 1227-1237 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01167
BindingDB Entry DOI: 10.7270/Q2VM4FH6
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232873
PNG
(CHEMBL4084029)
Show SMILES Cn1nc(cc1N)-c1ccccc1
Show InChI InChI=1S/C10H11N3/c1-13-10(11)7-9(12-13)8-5-3-2-4-6-8/h2-7H,11H2,1H3
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n/an/an/a 5.80E+6n/an/an/an/an/a


TBA



Citation and Details
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232873
PNG
(CHEMBL4084029)
Show SMILES Cn1nc(cc1N)-c1ccccc1
Show InChI InChI=1S/C10H11N3/c1-13-10(11)7-9(12-13)8-5-3-2-4-6-8/h2-7H,11H2,1H3
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n/an/an/a 5.80E+6n/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Binding affinity to human N-terminal His6-tagged truncated PHGDH (3 to 314 residues) expressed in Escherichia coli Rosetta (DE3) by ITC assay


J Med Chem 60: 1227-1237 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01167
BindingDB Entry DOI: 10.7270/Q2VM4FH6
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232875
PNG
(CHEMBL1901807)
Show SMILES Oc1ccc2C(=O)COc2c1
Show InChI InChI=1S/C8H6O3/c9-5-1-2-6-7(10)4-11-8(6)3-5/h1-3,9H,4H2
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n/an/an/a 5.90E+6n/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Binding affinity to human N-terminal His6-tagged truncated PHGDH (3 to 314 residues) expressed in Escherichia coli Rosetta (DE3) by ITC assay


J Med Chem 60: 1227-1237 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01167
BindingDB Entry DOI: 10.7270/Q2VM4FH6
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232875
PNG
(CHEMBL1901807)
Show SMILES Oc1ccc2C(=O)COc2c1
Show InChI InChI=1S/C8H6O3/c9-5-1-2-6-7(10)4-11-8(6)3-5/h1-3,9H,4H2
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n/an/an/a 5.90E+6n/an/an/an/an/a


TBA



Citation and Details
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232880
PNG
(Benzo[D]Isoxazol-3-Ol | CHEMBL444173)
Show SMILES Oc1noc2ccccc12
Show InChI InChI=1S/C7H5NO2/c9-7-5-3-1-2-4-6(5)10-8-7/h1-4H,(H,8,9)
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n/an/an/a 6.50E+6n/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Binding affinity to human N-terminal His6-tagged truncated PHGDH (3 to 314 residues) expressed in Escherichia coli Rosetta (DE3) by ITC assay


J Med Chem 60: 1227-1237 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01167
BindingDB Entry DOI: 10.7270/Q2VM4FH6
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50232880
PNG
(Benzo[D]Isoxazol-3-Ol | CHEMBL444173)
Show SMILES Oc1noc2ccccc12
Show InChI InChI=1S/C7H5NO2/c9-7-5-3-1-2-4-6(5)10-8-7/h1-4H,(H,8,9)
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n/an/an/a 6.50E+6n/an/an/an/an/a


TBA



Citation and Details
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50011537
PNG
(CHEMBL3262562)
Show SMILES Nc1cccc(c1)-c1cnco1
Show InChI InChI=1S/C9H8N2O/c10-8-3-1-2-7(4-8)9-5-11-6-12-9/h1-6H,10H2
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n/an/an/a 9.30E+6n/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Binding affinity to human N-terminal His6-tagged truncated PHGDH (3 to 314 residues) expressed in Escherichia coli Rosetta (DE3) by ITC assay


J Med Chem 60: 1227-1237 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01167
BindingDB Entry DOI: 10.7270/Q2VM4FH6
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50011537
PNG
(CHEMBL3262562)
Show SMILES Nc1cccc(c1)-c1cnco1
Show InChI InChI=1S/C9H8N2O/c10-8-3-1-2-7(4-8)9-5-11-6-12-9/h1-6H,10H2
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n/an/an/a 9.30E+6n/an/an/an/an/a


TBA



Citation and Details
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50455628
PNG
(CHEMBL4216063)
Show SMILES Cn1ccc2cc(N)ccc12
Show InChI InChI=1S/C9H10N2/c1-11-5-4-7-6-8(10)2-3-9(7)11/h2-6H,10H2,1H3
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n/an/an/a 1.11E+7n/an/an/an/an/a


TBA



Citation and Details
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50607974
PNG
(CHEMBL5275733)
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n/an/an/a 1.15E+7n/an/an/an/an/a


TBA



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More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM7887
PNG
(1-Benzylimidazole (BI) | 1-benzyl-1H-imidazole | 1...)
Show SMILES C(c1ccccc1)n1ccnc1
Show InChI InChI=1S/C10H10N2/c1-2-4-10(5-3-1)8-12-7-6-11-9-12/h1-7,9H,8H2
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n/an/an/a 1.18E+7n/an/an/an/an/a


TBA



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More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50365134
PNG
(CHEMBL1949840)
Show SMILES Fc1cccc2nc[nH]c(=O)c12
Show InChI InChI=1S/C8H5FN2O/c9-5-2-1-3-6-7(5)8(12)11-4-10-6/h1-4H,(H,10,11,12)
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n/an/an/a 1.28E+7n/an/an/an/an/a


TBA



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More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50607973
PNG
(CHEMBL5278022)
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n/an/an/a 1.66E+7n/an/an/an/an/a


TBA



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More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50607975
PNG
(CHEMBL5285114)
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n/an/an/a 2.62E+7n/an/an/an/an/a


TBA



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More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50512575
PNG
(CHEMBL4554985)
Show SMILES OC[C@@H](NC(=O)c1cc2cc(Cl)c(OC[C@@H]3CNC(=O)O3)cc2[nH]1)c1ccc(cc1)C(O)=O |r|
Show InChI InChI=1S/C22H20ClN3O7/c23-15-5-13-6-17(25-16(13)7-19(15)32-10-14-8-24-22(31)33-14)20(28)26-18(9-27)11-1-3-12(4-2-11)21(29)30/h1-7,14,18,25,27H,8-10H2,(H,24,31)(H,26,28)(H,29,30)/t14-,18+/m0/s1
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214n/an/an/an/an/an/an/an/a



Meyer Cancer Center

Curated by ChEMBL


Assay Description
Mixed type inhibition of PHGDH (unknown origin) using 3-PG as substrate incubated for 20 mins in presence of , PSAT1, PSPH and varying NAD+ by diapho...


Bioorg Med Chem Lett 29: 2503-2510 (2019)


Article DOI: 10.1016/j.bmcl.2019.07.011
BindingDB Entry DOI: 10.7270/Q27D2ZGJ
More data for this
Ligand-Target Pair
3D
3D Structure (crystal)
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50230352
PNG
(CHEMBL4086943)
Show SMILES O=C(C(=S)N1CCOCC1)c1ccccc1
Show InChI InChI=1S/C12H13NO2S/c14-11(10-4-2-1-3-5-10)12(16)13-6-8-15-9-7-13/h1-5H,6-9H2
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2.70E+4n/an/an/an/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Non-competitive inhibition of recombinant human C-terminal His-tagged PHGDH (1 to 533 residues) expressed in Escherichia coli assessed as reduction i...


J Med Chem 60: 1591-1597 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01166
BindingDB Entry DOI: 10.7270/Q21N83CP
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50230352
PNG
(CHEMBL4086943)
Show SMILES O=C(C(=S)N1CCOCC1)c1ccccc1
Show InChI InChI=1S/C12H13NO2S/c14-11(10-4-2-1-3-5-10)12(16)13-6-8-15-9-7-13/h1-5H,6-9H2
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4.00E+4n/an/an/an/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Non-competitive inhibition of recombinant human C-terminal His-tagged PHGDH (1 to 533 residues) expressed in Escherichia coli assessed as reduction i...


J Med Chem 60: 1591-1597 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01166
BindingDB Entry DOI: 10.7270/Q21N83CP
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM58473
PNG
(MLS001172437 | N-(4-methyl-2-pyridinyl)-4-[3-(trif...)
Show SMILES Cc1ccnc(NC(=S)N2CCN(CC2)c2cccc(c2)C(F)(F)F)c1
Show InChI InChI=1S/C18H19F3N4S/c1-13-5-6-22-16(11-13)23-17(26)25-9-7-24(8-10-25)15-4-2-3-14(12-15)18(19,20)21/h2-6,11-12H,7-10H2,1H3,(H,22,23,26)
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n/an/a 1.53E+4n/an/an/an/a8.025



Whitehead Institute for Biomedical Research



Assay Description
PHGDH assay buffer contained 50 mM TEA pH 8.0, 10 mM MgCl2, 0.05% BSA, and 0.01% Tween-20. PHGDH enzyme buffer consisted of assay buffer with 20 nM P...


Nat Chem Biol 12: 452-8 (2016)


Article DOI: 10.1038/nchembio.2070
BindingDB Entry DOI: 10.7270/Q2H70DN5
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM195605
PNG
(NCT-502 | US11225469, Compound 72)
Show SMILES Cc1cc(C)nc(NC(=S)N2CCN(CC2)c2ccc(cn2)C(F)(F)F)c1
Show InChI InChI=1S/C18H20F3N5S/c1-12-9-13(2)23-15(10-12)24-17(27)26-7-5-25(6-8-26)16-4-3-14(11-22-16)18(19,20)21/h3-4,9-11H,5-8H2,1-2H3,(H,23,24,27)
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n/an/a 3.70E+3n/an/an/an/a8.025



Whitehead Institute for Biomedical Research



Assay Description
PHGDH assay buffer contained 50 mM TEA pH 8.0, 10 mM MgCl2, 0.05% BSA, and 0.01% Tween-20. PHGDH enzyme buffer consisted of assay buffer with 20 nM P...


Nat Chem Biol 12: 452-8 (2016)


Article DOI: 10.1038/nchembio.2070
BindingDB Entry DOI: 10.7270/Q2H70DN5
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM195606
PNG
(NCT-503)
Show SMILES Cc1cc(C)nc(NC(=S)N2CCN(Cc3ccc(cc3)C(F)(F)F)CC2)c1
Show InChI InChI=1S/C20H23F3N4S/c1-14-11-15(2)24-18(12-14)25-19(28)27-9-7-26(8-10-27)13-16-3-5-17(6-4-16)20(21,22)23/h3-6,11-12H,7-10,13H2,1-2H3,(H,24,25,28)
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n/an/a 2.50E+3n/an/an/an/a8.025



Whitehead Institute for Biomedical Research



Assay Description
PHGDH assay buffer contained 50 mM TEA pH 8.0, 10 mM MgCl2, 0.05% BSA, and 0.01% Tween-20. PHGDH enzyme buffer consisted of assay buffer with 20 nM P...


Nat Chem Biol 12: 452-8 (2016)


Article DOI: 10.1038/nchembio.2070
BindingDB Entry DOI: 10.7270/Q2H70DN5
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM195607
PNG
(PHGDH-inactive | US11225469, Compound 71)
Show SMILES Cc1cc(C)nc(NC(=S)N2CCN(CC2)c2ccncc2)c1
Show InChI InChI=1S/C17H21N5S/c1-13-11-14(2)19-16(12-13)20-17(23)22-9-7-21(8-10-22)15-3-5-18-6-4-15/h3-6,11-12H,7-10H2,1-2H3,(H,19,20,23)
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n/an/a>5.70E+4n/an/an/an/a8.025



Whitehead Institute for Biomedical Research



Assay Description
PHGDH assay buffer contained 50 mM TEA pH 8.0, 10 mM MgCl2, 0.05% BSA, and 0.01% Tween-20. PHGDH enzyme buffer consisted of assay buffer with 20 nM P...


Nat Chem Biol 12: 452-8 (2016)


Article DOI: 10.1038/nchembio.2070
BindingDB Entry DOI: 10.7270/Q2H70DN5
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM209925
PNG
(PKUMDL-WQ-2201)
Show SMILES CCNC(=S)N\N=C/c1ccc(o1)-c1ccc(C(O)=O)c(Cl)c1
Show InChI InChI=1S/C15H14ClN3O3S/c1-2-17-15(23)19-18-8-10-4-6-13(22-10)9-3-5-11(14(20)21)12(16)7-9/h3-8H,2H2,1H3,(H,20,21)(H2,17,19,23)/b18-8-
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n/an/a 3.57E+4n/an/an/an/a7.1n/a



Peking University



Assay Description
To evaluate the effects of compounds on PHGDH activity, compounds were first pre-incubated with enzyme samples in the assay buffer (25 mM HEPES, pH 7...


Cell Chem Biol 24: 55-65 (2017)


Article DOI: 10.1016/j.chembiol.2016.11.013
BindingDB Entry DOI: 10.7270/Q2X63KR3
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM209926
PNG
(PKUMDL-WQ-2202)
Show SMILES Cc1c(\N=N\c2cccc(c2)C(O)=O)c(O)[nH]c(=O)c1C#N
Show InChI InChI=1S/C14H10N4O4/c1-7-10(6-15)12(19)16-13(20)11(7)18-17-9-4-2-3-8(5-9)14(21)22/h2-5H,1H3,(H,21,22)(H2,16,19,20)/b18-17+
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n/an/a 4.20E+4n/an/an/an/a7.1n/a



Peking University



Assay Description
To evaluate the effects of compounds on PHGDH activity, compounds were first pre-incubated with enzyme samples in the assay buffer (25 mM HEPES, pH 7...


Cell Chem Biol 24: 55-65 (2017)


Article DOI: 10.1016/j.chembiol.2016.11.013
BindingDB Entry DOI: 10.7270/Q2X63KR3
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM209927
PNG
(PKUMDL-WQ-2203)
Show SMILES OC(=O)CSC1=C(SCC(O)=O)C(=O)C(SCC(O)=O)=C(SCC(O)=O)C1=O |c:5,t:19|
Show InChI InChI=1S/C14H12O10S4/c15-5(16)1-25-11-9(23)13(27-3-7(19)20)14(28-4-8(21)22)10(24)12(11)26-2-6(17)18/h1-4H2,(H,15,16)(H,17,18)(H,19,20)(H,21,22)
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n/an/a 2.81E+4n/an/an/an/a7.1n/a



Peking University



Assay Description
To evaluate the effects of compounds on PHGDH activity, compounds were first pre-incubated with enzyme samples in the assay buffer (25 mM HEPES, pH 7...


Cell Chem Biol 24: 55-65 (2017)


Article DOI: 10.1016/j.chembiol.2016.11.013
BindingDB Entry DOI: 10.7270/Q2X63KR3
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM209924
PNG
(PKUMDL-WQ-2101 | US10722489, Compound PKUMDL-WL-21...)
Show SMILES Oc1ccc(C(=O)N\N=C\c2cc(ccc2O)[N+]([O-])=O)c(O)c1
Show InChI InChI=1S/C14H11N3O6/c18-10-2-3-11(13(20)6-10)14(21)16-15-7-8-5-9(17(22)23)1-4-12(8)19/h1-7,18-20H,(H,16,21)/b15-7+
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n/an/a 3.48E+4n/an/an/an/a7.1n/a



Peking University



Assay Description
To evaluate the effects of compounds on PHGDH activity, compounds were first pre-incubated with enzyme samples in the assay buffer (25 mM HEPES, pH 7...


Cell Chem Biol 24: 55-65 (2017)


Article DOI: 10.1016/j.chembiol.2016.11.013
BindingDB Entry DOI: 10.7270/Q2X63KR3
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM209924
PNG
(PKUMDL-WQ-2101 | US10722489, Compound PKUMDL-WL-21...)
Show SMILES Oc1ccc(C(=O)N\N=C\c2cc(ccc2O)[N+]([O-])=O)c(O)c1
Show InChI InChI=1S/C14H11N3O6/c18-10-2-3-11(13(20)6-10)14(21)16-15-7-8-5-9(17(22)23)1-4-12(8)19/h1-7,18-20H,(H,16,21)/b15-7+
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n/an/a 4.49E+4n/an/an/an/a7.1n/a



Peking University



Assay Description
To evaluate the effects of compounds on PHGDH activity, compounds were first pre-incubated with enzyme samples in the assay buffer (25 mM HEPES, pH 7...


Cell Chem Biol 24: 55-65 (2017)


Article DOI: 10.1016/j.chembiol.2016.11.013
BindingDB Entry DOI: 10.7270/Q2X63KR3
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM209928
PNG
(PKUMDL-WQ-2101-Biotin)
Show SMILES Oc1ccc(C(=O)N\N=C\c2cc(cc(COC(=O)CCCC[C@@H]3SC[C@@H]4NC(=O)N[C@H]34)c2O)[N+]([O-])=O)c(O)c1 |r|
Show InChI InChI=1S/C25H27N5O9S/c31-16-5-6-17(19(32)9-16)24(35)29-26-10-13-7-15(30(37)38)8-14(23(13)34)11-39-21(33)4-2-1-3-20-22-18(12-40-20)27-25(36)28-22/h5-10,18,20,22,31-32,34H,1-4,11-12H2,(H,29,35)(H2,27,28,36)/b26-10+/t18-,20-,22-/m0/s1
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n/an/a 4.95E+4n/an/an/an/a7.1n/a



Peking University



Assay Description
To evaluate the effects of compounds on PHGDH activity, compounds were first pre-incubated with enzyme samples in the assay buffer (25 mM HEPES, pH 7...


Cell Chem Biol 24: 55-65 (2017)


Article DOI: 10.1016/j.chembiol.2016.11.013
BindingDB Entry DOI: 10.7270/Q2X63KR3
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM209924
PNG
(PKUMDL-WQ-2101 | US10722489, Compound PKUMDL-WL-21...)
Show SMILES Oc1ccc(C(=O)N\N=C\c2cc(ccc2O)[N+]([O-])=O)c(O)c1
Show InChI InChI=1S/C14H11N3O6/c18-10-2-3-11(13(20)6-10)14(21)16-15-7-8-5-9(17(22)23)1-4-12(8)19/h1-7,18-20H,(H,16,21)/b15-7+
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n/an/a 560n/an/an/an/a7.4n/a



Peking University



Assay Description
The binding affinities of compounds towards PHGDH were assayed using the SPR-based Biacore T200 instrument (GE Healthcare). PHGDH was immobilized on ...


Cell Chem Biol 24: 55-65 (2017)


Article DOI: 10.1016/j.chembiol.2016.11.013
BindingDB Entry DOI: 10.7270/Q2X63KR3
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50230342
PNG
(CHEMBL4074316)
Show SMILES Fc1ccccc1C(=O)C(=S)N1CCOCC1
Show InChI InChI=1S/C12H12FNO2S/c13-10-4-2-1-3-9(10)11(15)12(17)14-5-7-16-8-6-14/h1-4H,5-8H2
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n/an/a>2.00E+5n/an/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Inhibition of recombinant human C-terminal His-tagged PHGDH (1 to 533 residues) expressed in Escherichia coli assessed as reduction in NADH formation...


J Med Chem 60: 1591-1597 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01166
BindingDB Entry DOI: 10.7270/Q21N83CP
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50230343
PNG
(CHEMBL4094815)
Show SMILES Fc1cccc(c1)C(=O)C(=S)N1CCOCC1
Show InChI InChI=1S/C12H12FNO2S/c13-10-3-1-2-9(8-10)11(15)12(17)14-4-6-16-7-5-14/h1-3,8H,4-7H2
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n/an/a>2.00E+5n/an/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Inhibition of recombinant human C-terminal His-tagged PHGDH (1 to 533 residues) expressed in Escherichia coli assessed as reduction in NADH formation...


J Med Chem 60: 1591-1597 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01166
BindingDB Entry DOI: 10.7270/Q21N83CP
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50230344
PNG
(CHEMBL4060605)
Show SMILES Fc1ccc(cc1)C(=O)C(=S)N1CCOCC1
Show InChI InChI=1S/C12H12FNO2S/c13-10-3-1-9(2-4-10)11(15)12(17)14-5-7-16-8-6-14/h1-4H,5-8H2
PDB

UniProtKB/SwissProt

GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a 6.89E+4n/an/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Inhibition of recombinant human C-terminal His-tagged PHGDH (1 to 533 residues) expressed in Escherichia coli assessed as reduction in NADH formation...


J Med Chem 60: 1591-1597 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01166
BindingDB Entry DOI: 10.7270/Q21N83CP
More data for this
Ligand-Target Pair
D-3-phosphoglycerate dehydrogenase


(Homo sapiens (Human))
BDBM50230348
PNG
(CHEMBL4080013)
Show SMILES Brc1ccccc1C(=O)C(=S)N1CCOCC1
Show InChI InChI=1S/C12H12BrNO2S/c13-10-4-2-1-3-9(10)11(15)12(17)14-5-7-16-8-6-14/h1-4H,5-8H2
PDB

UniProtKB/SwissProt

GoogleScholar
AffyNet 
CHEMBL
PC cid
PC sid
UniChem

Similars

Article
PubMed
n/an/a 1.61E+5n/an/an/an/an/an/a



Universit£ Catholique de Louvain

Curated by ChEMBL


Assay Description
Inhibition of recombinant human C-terminal His-tagged PHGDH (1 to 533 residues) expressed in Escherichia coli assessed as reduction in NADH formation...


J Med Chem 60: 1591-1597 (2017)


Article DOI: 10.1021/acs.jmedchem.6b01166
BindingDB Entry DOI: 10.7270/Q21N83CP
More data for this
Ligand-Target Pair
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